RNA–Protein interactions for RNA: ENST00000384310.1

RNU6-339P-201, Transcript of RNA, U6 small nuclear 339, pseudogene, humanhuman

BASIC

Gene RNU6-339P, Length 107 nt, Biotype snRNA.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-339P-201ENST00000384310 PPP1R1CQ8WVI7 109 aa1.44□□□□□ -2.18
RNU6-339P-201ENST00000384310 PTPRMP28827 1452 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 EIF4G3O43432 1585 aaKnown RBP1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 SDK1Q7Z5N4 2213 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 ALPK3Q96L96 1907 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 MYH13Q9UKX3 1938 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 TRBV30A0A0K0K1B3 111 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 TRBV10-3A0A0K0K1G6 114 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 FAM24AA6NFZ4 105 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 FXYD1O00168 92 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 SMIM6P0DI80 62 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 HSD52Q0P140 79 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 KRTAP5-4Q6L8H1 288 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 KRTAP5-1Q6L8H4 278 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 C20orf197Q8N268 126 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 COA4Q9NYJ1 87 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 BET1LQ9NYM9 111 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 ANK1P16157 1881 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 KIF13AQ9H1H9 1805 aa1.43□□□□□ -2.18
RNU6-339P-201ENST00000384310 MYH6P13533 1939 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 TRPM7Q96QT4 1865 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 TMEM218A2RU14 115 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 HCG22E2RYF7 251 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 CCL8P80075 99 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 KRTAP21-3Q3LHN1 58 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 DSCR8Q96T75 97 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 FOCADQ5VW36 1801 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 IFT140Q96RY7 1462 aa1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 CDK12Q9NYV4 1490 aaPredicted RBP1.42□□□□□ -2.18
RNU6-339P-201ENST00000384310 HIVEP2P31629 2446 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 SPEF2Q9C093 1822 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 A0A1W2PPM0 123 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 SPINK8P0C7L1 97 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 KRTAP12-4P60329 112 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 SSBP1Q04837 148 aaKnown RBP1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 LINC00575Q6W349 94 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 ZNF818PQ6ZRF7 136 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 C5orf38Q86SI9 138 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 MYOM2P54296 1465 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 EML5Q05BV3 1969 aa1.41□□□□□ -2.18
RNU6-339P-201ENST00000384310 MYO18AQ92614 2054 aaKnown RBP1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 TNRC6AQ8NDV7 1962 aaKnown RBP1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 RIMS1Q86UR5 1692 aaKnown RBP1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 CTTNBP2Q8WZ74 1663 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 TRAV13-2A0A0B4J235 113 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 SIX6O95475 246 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 UBE2D1P51668 147 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 ELOF1P60002 83 aaKnown RBP1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 COX7B2Q8TF08 81 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 AQP10Q96PS8 301 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 KRTAP4-4Q9BYR3 166 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 LINC00312Q9Y6C7 94 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 CHD3Q12873 2000 aaKnown RBP1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 PTPRDP23468 1912 aa1.4□□□□□ -2.19
RNU6-339P-201ENST00000384310 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 TRAV30A0A087WSZ9 112 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 RBAKDNA6NC62 111 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 CCL3L1P16619 93 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 KLKP1Q107X0 134 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 FAM74A4Q5TZK3 123 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 MCM3APO60318 1980 aa1.39□□□□□ -2.19
RNU6-339P-201ENST00000384310 PZPP20742 1482 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 CASP8AP2Q9UKL3 1982 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 SSSCA1O60232 199 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 C10orf128Q5T292 105 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 ACBD7Q8N6N7 88 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 TET1Q8NFU7 2136 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 DPH3P1Q9H4G8 78 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 BLMP54132 1417 aaPredicted RBP1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 NINQ8N4C6 2090 aa1.38□□□□□ -2.19
RNU6-339P-201ENST00000384310 PHRF1Q9P1Y6 1649 aaKnown RBP1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 TRBV7-1A0A0A6YYK4 115 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 UBE2L5PA0A1B0GUS4 154 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 S100A8P05109 93 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 UBE2L3P68036 154 aaKnown RBP1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 DCDP81605 110 aaKnown RBP1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 C10orf99Q6UWK7 81 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 COMMD6Q7Z4G1 85 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 TMEM14BQ9NUH8 114 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 V9GYV3 84 aa1.37□□□□□ -2.19
RNU6-339P-201ENST00000384310 E9PCH4 1651 aa1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 M0R143 59 aa1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 CPSF1Q10570 1443 aaKnown RBP1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 TTC9CQ8N5M4 171 aa1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 CYP4F30PQ9H0H9 118 aa1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 MYH7P12883 1935 aa1.36□□□□□ -2.19
RNU6-339P-201ENST00000384310 AKAP11Q9UKA4 1901 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 ATP5EP56381 51 aaPredicted RBP1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 EDDM3BP56851 147 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 S100A10P60903 97 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 MYOZ3Q8TDC0 251 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 PLAC4Q8WY50 150 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 CACNA1BQ00975 2339 aa1.35□□□□□ -2.19
RNU6-339P-201ENST00000384310 RBBP6Q7Z6E9 1792 aaKnown RBP1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 CLPSL1A2RUU4 121 aa1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 TMEM262E9PQX1 116 aa1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 ARL14EPLP0DKL9 152 aa1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 NCMAPQ5T1S8 102 aa1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 LCE1CQ5T751 118 aa1.34□□□□□ -2.19
RNU6-339P-201ENST00000384310 LCE1BQ5T7P3 118 aa1.34□□□□□ -2.19
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms