RNA–Protein interactions for RNA: ENST00000381118.7

ERCC8-202, Transcript of ERCC excision repair 8, CSA ubiquitin ligase complex subunit, humanhuman

TSL 2

Gene ERCC8, Length 2,236 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERCC8-202ENST00000381118 RNASE8Q8TDE3 154 aaKnown RBP5.79□□□□□ -1.48
ERCC8-202ENST00000381118 IGHV3-73A0A0B4J1V6 119 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 F5H697 171 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 RRN3P1Q2M238 152 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 COA6Q5JTJ3 125 aaKnown RBP5.78□□□□□ -1.48
ERCC8-202ENST00000381118 ZNF705AQ6ZN79 300 aaPredicted RBP5.78□□□□□ -1.48
ERCC8-202ENST00000381118 TMEM263Q8WUH6 116 aaKnown RBP5.78□□□□□ -1.48
ERCC8-202ENST00000381118 LINC00467Q9BRT7 94 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 M0R2P5 195 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 PMCHP20382 165 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 EMP1P54849 157 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 EGFEM1PQ0D2K5 195 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 ZNF56Q15929 161 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 LURAP1LQ8IV03 231 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 FAM19A2Q8N3H0 131 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 U3KQK5 164 aa5.78□□□□□ -1.48
ERCC8-202ENST00000381118 TRGV1A0A0A0MS02 117 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 TNFRSF6BO95407 300 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 IFI27P40305 119 aaPredicted RBP5.77□□□□□ -1.49
ERCC8-202ENST00000381118 APOC4P55056 127 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 PMCHL1Q16048 86 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 NIT1Q86X76 327 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 RPL39LQ96EH5 51 aaKnown RBP5.77□□□□□ -1.49
ERCC8-202ENST00000381118 URB1-AS1Q96HZ7 61 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 HIST1H2BLQ99880 126 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 NOP10Q9NPE3 64 aaKnown RBP5.77□□□□□ -1.49
ERCC8-202ENST00000381118 KIF25-AS1Q9Y6Z4 181 aa5.77□□□□□ -1.49
ERCC8-202ENST00000381118 HSBP1O75506 76 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 PRB2P02812 416 aaPredicted RBP5.76□□□□□ -1.49
ERCC8-202ENST00000381118 CRYGDP07320 174 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 LINC00315P59091 139 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 PRSS3P2Q8NHM4 247 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 C16orf74Q96GX8 76 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 PPBPP02775 128 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 LINC00614P0C842 121 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 AMTP48728 403 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 SUMO4Q6EEV6 95 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 Q6ZTI0 123 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 OR10D4PQ8NGN7 298 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 PACRGQ96M98 296 aaPredicted RBP5.76□□□□□ -1.49
ERCC8-202ENST00000381118 SPXQ9BT56 116 aa5.76□□□□□ -1.49
ERCC8-202ENST00000381118 NBEAL1Q6ZS30 2694 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 KIR2DL5BA0A0G2JN68 375 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 KIR2DL5BA0A0G2JPC4 375 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 PLAC8L1A1L4L8 177 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 SAMD5Q5TGI4 173 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 KIR2DL5AQ8N109 375 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 NRACQ8N912 160 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 KIR2DL5BQ8NHK3 375 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 IL17DQ8TAD2 202 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 RASL10AQ92737 203 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 TMEM18Q96B42 140 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 MRAP2Q96G30 205 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 MAP1LC3AQ9H492 121 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 A8MWV9 139 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 DEFB4AO15263 64 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 IGHV3-53P01767 116 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 CFAP126Q5VTH2 177 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 FA2HQ7L5A8 372 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 DEFB104AQ8WTQ1 72 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 X6R8D5 127 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 MGAM2Q2M2H8 2515 aa5.75□□□□□ -1.49
ERCC8-202ENST00000381118 DNHD1Q96M86 4753 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 GAGE12BA1L429 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 GAGE7O76087 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 GAGE12FP0CL80 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 GAGE12GP0CL81 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 GAGE12IP0CL82 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 ESDP10768 282 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 OR11H2Q8NH07 326 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 AP5S1Q9NUS5 200 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 LAMTOR2Q9Y2Q5 125 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 IGHV1-24A0A0C4DH33 117 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 POM121L12Q8N7R1 296 aa5.74□□□□□ -1.49
ERCC8-202ENST00000381118 CHCHD1Q96BP2 118 aaKnown RBP5.74□□□□□ -1.49
ERCC8-202ENST00000381118 ZMAT5Q9UDW3 170 aaKnown RBP5.74□□□□□ -1.49
ERCC8-202ENST00000381118 TRGV2A0A075B6R0 118 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 P0DMU3 169 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 FAM231AP0DMU4 169 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 FAM231CP0DMU5 169 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 SUMO2P61956 95 aaKnown RBP5.73□□□□□ -1.49
ERCC8-202ENST00000381118 DAZ2Q13117 558 aaKnown RBP5.73□□□□□ -1.49
ERCC8-202ENST00000381118 NEGR1Q7Z3B1 354 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 OR4C5Q8NGB2 326 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 ZNF479Q96JC4 524 aa5.73□□□□□ -1.49
ERCC8-202ENST00000381118 M0QY20 66 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 TCAPO15273 167 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 DEFB130BP0DP73 79 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 DEFB130AP0DP74 79 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 RIPPLY3P57055 190 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 Q6ZSN1 163 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 RETNQ9HD89 108 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 RS1O15537 224 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 LGALS9BQ3B8N2 356 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 PIK3CD-AS1Q5SR53 167 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 UFSP1Q6NVU6 142 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 PTH2Q96A98 100 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 NXT2Q9NPJ8 142 aaKnown RBP5.72□□□□□ -1.49
ERCC8-202ENST00000381118 Q9UF83 564 aa5.72□□□□□ -1.49
ERCC8-202ENST00000381118 IGLV2-18A0A075B6J9 118 aa5.71□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 81.4 ms