RNA–Protein interactions for RNA: ENST00000380741.8

SMN2-201, Transcript of survival of motor neuron 2, centromeric, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene SMN2, Length 900 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMN2-201ENST00000380741 Q6ZSA8 131 aa11.13□□□□□ -0.63
SMN2-201ENST00000380741 COX8CQ7Z4L0 72 aa11.13□□□□□ -0.63
SMN2-201ENST00000380741 SYT8Q8NBV8 401 aa11.13□□□□□ -0.63
SMN2-201ENST00000380741 OR11H4Q8NGC9 324 aa11.13□□□□□ -0.63
SMN2-201ENST00000380741 AKR1C8PQ5T2L2 129 aa11.12□□□□□ -0.63
SMN2-201ENST00000380741 FAM162BQ5T6X4 162 aa11.12□□□□□ -0.63
SMN2-201ENST00000380741 BAALCQ8WXS3 180 aa11.12□□□□□ -0.63
SMN2-201ENST00000380741 DNAJC30Q96LL9 226 aa11.12□□□□□ -0.63
SMN2-201ENST00000380741 A0A087WWL8 130 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 NIT1Q86X76 327 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 SFRP2Q96HF1 295 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 FMC1Q96HJ9 113 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 ZFP30Q9Y2G7 519 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 PHLDA3Q9Y5J5 127 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 URGCP-MRPS24S4R325 110 aa11.11□□□□□ -0.63
SMN2-201ENST00000380741 TMSB15BA0A087X1C1 80 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 MAP1LC3B2A6NCE7 125 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 G3V3Q6 166 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 M0R381 172 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 UBE2G1P62253 170 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 ZNF674Q2M3X9 581 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 LINC01559Q495D7 138 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 MAP1LC3BQ9GZQ8 125 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 BATF3Q9NR55 127 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 COX11Q9Y6N1 276 aa11.1□□□□□ -0.63
SMN2-201ENST00000380741 TPT1P13693 172 aaKnown RBP11.09□□□□□ -0.63
SMN2-201ENST00000380741 LINC01620Q4KN68 170 aa11.09□□□□□ -0.63
SMN2-201ENST00000380741 LINC00528Q8N1L1 170 aa11.09□□□□□ -0.63
SMN2-201ENST00000380741 RMI2Q96E14 147 aa11.09□□□□□ -0.63
SMN2-201ENST00000380741 KLK12Q9UKR0 248 aa11.09□□□□□ -0.63
SMN2-201ENST00000380741 IGKV2D-24A0A075B6R9 120 aa11.08□□□□□ -0.64
SMN2-201ENST00000380741 LTAP01374 205 aa11.08□□□□□ -0.64
SMN2-201ENST00000380741 CYTL1Q9NRR1 136 aa11.08□□□□□ -0.64
SMN2-201ENST00000380741 TRBV6-1A0A0K0K1D8 114 aa11.07□□□□□ -0.64
SMN2-201ENST00000380741 PLA2G1BP04054 148 aaKnown RBP11.07□□□□□ -0.64
SMN2-201ENST00000380741 CST9LP1Q5W188 147 aa11.07□□□□□ -0.64
SMN2-201ENST00000380741 ZFP82Q8N141 532 aa11.07□□□□□ -0.64
SMN2-201ENST00000380741 UBE2WQ96B02 151 aa11.07□□□□□ -0.64
SMN2-201ENST00000380741 TCEAL7Q9BRU2 100 aa11.07□□□□□ -0.64
SMN2-201ENST00000380741 A0A087WX48 190 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 TRBV10-1A0A0K0K1A3 114 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 J3QL48 77 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 ARPC5O15511 151 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 SEC11BP0C7V7 166 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 FHITP49789 147 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 UBE2D3P61077 147 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 UBE2D2P62837 147 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 SCXQ7RTU7 201 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 Q8N976 141 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 CHCHD7Q9BUK0 85 aa11.06□□□□□ -0.64
SMN2-201ENST00000380741 LRP1Q07954 4544 aaKnown RBP11.05□□□□□ -0.64
SMN2-201ENST00000380741 RBFOX3A6NFN3 312 aa11.05□□□□□ -0.64
SMN2-201ENST00000380741 AKR1C3P42330 323 aa11.05□□□□□ -0.64
SMN2-201ENST00000380741 RPL36AP83881 106 aaKnown RBP11.05□□□□□ -0.64
SMN2-201ENST00000380741 RPL36ALQ969Q0 106 aaKnown RBP11.05□□□□□ -0.64
SMN2-201ENST00000380741 TRBV7-3A0A075B6L6 115 aa11.04□□□□□ -0.64
SMN2-201ENST00000380741 KCNIP4Q6PIL6 250 aa11.04□□□□□ -0.64
SMN2-201ENST00000380741 STOML3Q8TAV4 291 aa11.04□□□□□ -0.64
SMN2-201ENST00000380741 PAGE4O60829 102 aa11.03□□□□□ -0.64
SMN2-201ENST00000380741 RPL19P84098 196 aaKnown RBP11.03□□□□□ -0.64
SMN2-201ENST00000380741 ELOBQ15370 118 aa11.03□□□□□ -0.64
SMN2-201ENST00000380741 ATRAIDQ6UW56 229 aa11.03□□□□□ -0.64
SMN2-201ENST00000380741 OR10G8Q8NGN5 311 aa11.03□□□□□ -0.64
SMN2-201ENST00000380741 OR10AG1Q8NH19 301 aa11.02□□□□□ -0.65
SMN2-201ENST00000380741 FAT3Q8TDW7 4589 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 TRBV6-8A0A0A6YYG3 113 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 TMEM262E9PQX1 116 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 RAB4BP61018 213 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 Q0VG73 95 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 ZNF56Q15929 161 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 NEXN-AS1Q8NBZ9 246 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 DEFB104AQ8WTQ1 72 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 CHAC1Q9BUX1 264 aa11.01□□□□□ -0.65
SMN2-201ENST00000380741 SCO2A0A1W2PP80 73 aa11□□□□□ -0.65
SMN2-201ENST00000380741 SMLR1H3BR10 107 aa11□□□□□ -0.65
SMN2-201ENST00000380741 A0A1B0GV50 99 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 KRTAP29-1A8MX34 341 aaPredicted RBP10.99□□□□□ -0.65
SMN2-201ENST00000380741 CXCL1P09341 107 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 MPV17L2Q567V2 206 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 PRR27Q6MZM9 219 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 ENHOQ6UWT2 76 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 C15orf54Q8N8G6 183 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 FAM213BQ8TBF2 198 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 CIRBP-AS1Q8TBR5 109 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 SFT2D1Q8WV19 159 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 MLST8Q9BVC4 326 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 C1orf43Q9BWL3 253 aa10.99□□□□□ -0.65
SMN2-201ENST00000380741 ZNF471Q9BX82 626 aaPredicted RBP10.99□□□□□ -0.65
SMN2-201ENST00000380741 MUC21A0A0G2JKD1 596 aa10.98□□□□□ -0.65
SMN2-201ENST00000380741 MUC21A0A140T8X8 626 aa10.98□□□□□ -0.65
SMN2-201ENST00000380741 CRPP02741 224 aa10.98□□□□□ -0.65
SMN2-201ENST00000380741 S100A9P06702 114 aaKnown RBP10.98□□□□□ -0.65
SMN2-201ENST00000380741 MBD3L1Q8WWY6 194 aa10.98□□□□□ -0.65
SMN2-201ENST00000380741 SSBP4Q9BWG4 385 aaPredicted RBP10.98□□□□□ -0.65
SMN2-201ENST00000380741 SNAI2O43623 268 aa10.97□□□□□ -0.65
SMN2-201ENST00000380741 KRTAP10-4P60372 401 aaPredicted RBP10.97□□□□□ -0.65
SMN2-201ENST00000380741 ZNF345Q14585 488 aa10.97□□□□□ -0.65
SMN2-201ENST00000380741 RGS21Q2M5E4 152 aa10.97□□□□□ -0.65
SMN2-201ENST00000380741 BAGE2Q86Y30 109 aa10.97□□□□□ -0.65
SMN2-201ENST00000380741 KCNRGQ8N5I3 272 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 123.2 ms