RNA–Protein interactions for RNA: ENST00000380324.7

USP3-202, Transcript of ubiquitin specific peptidase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP3, Length 2,333 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-202ENST00000380324 C16orf95Q9H693 158 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 NSD1Q96L73 2696 aaPredicted RBP8.86□□□□□ -0.99
USP3-202ENST00000380324 TRAV2A0A0B4J234 112 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 CBY3A6NI87 242 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 M0R143 59 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 C9orf85Q96MD7 179 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 SPAG8Q99932 426 aaPredicted RBP8.86□□□□□ -0.99
USP3-202ENST00000380324 ZNF256Q9Y2P7 627 aaPredicted RBP8.86□□□□□ -0.99
USP3-202ENST00000380324 GOLT1BQ9Y3E0 138 aa8.86□□□□□ -0.99
USP3-202ENST00000380324 TCTAP57738 103 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 LAGE3Q14657 143 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 A0A1B0GV90 55 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 F5H697 171 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 PRM2P04554 102 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
USP3-202ENST00000380324 LINC00315P59091 139 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 NSUN5P1Q3KNT7 163 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 ODF3L2Q3SX64 289 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 NEGR1Q7Z3B1 354 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 DEFB104AQ8WTQ1 72 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 ST20Q9HBF5 79 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 TMEM160Q9NX00 188 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 C2CD3Q4AC94 2353 aa8.84□□□□□ -0.99
USP3-202ENST00000380324 NUDT3O95989 172 aa8.83□□□□□ -1
USP3-202ENST00000380324 SUMO4Q6EEV6 95 aa8.83□□□□□ -1
USP3-202ENST00000380324 SYT8Q8NBV8 401 aa8.83□□□□□ -1
USP3-202ENST00000380324 C2orf88Q9BSF0 95 aa8.83□□□□□ -1
USP3-202ENST00000380324 TRGV11A0A075B6L2 103 aa8.83□□□□□ -1
USP3-202ENST00000380324 SAP30O75446 220 aa8.83□□□□□ -1
USP3-202ENST00000380324 ZNF56Q15929 161 aa8.83□□□□□ -1
USP3-202ENST00000380324 LGALS9BQ3B8N2 356 aa8.83□□□□□ -1
USP3-202ENST00000380324 LGALS9CQ6DKI2 356 aa8.83□□□□□ -1
USP3-202ENST00000380324 DEFB125Q8N687 156 aa8.83□□□□□ -1
USP3-202ENST00000380324 FN1P02751 2386 aaKnown RBP8.83□□□□□ -1
USP3-202ENST00000380324 INAFM1C9JVW0 142 aa8.82□□□□□ -1
USP3-202ENST00000380324 PRSS1P07477 247 aa8.82□□□□□ -1
USP3-202ENST00000380324 ZNF876PQ49A33 203 aa8.82□□□□□ -1
USP3-202ENST00000380324 LBHQ53QV2 105 aaPredicted RBP8.82□□□□□ -1
USP3-202ENST00000380324 C20orf78Q9BR46 151 aa8.82□□□□□ -1
USP3-202ENST00000380324 DKK2Q9UBU2 259 aa8.82□□□□□ -1
USP3-202ENST00000380324 A8MTW9 85 aa8.82□□□□□ -1
USP3-202ENST00000380324 CSTL1Q9H114 145 aa8.82□□□□□ -1
USP3-202ENST00000380324 HIVEP1P15822 2718 aa8.81□□□□□ -1
USP3-202ENST00000380324 PROK1P58294 105 aa8.81□□□□□ -1
USP3-202ENST00000380324 TMEM238LA0A1B0GVL6 79 aa8.81□□□□□ -1
USP3-202ENST00000380324 STPG4Q8N801 248 aa8.81□□□□□ -1
USP3-202ENST00000380324 TRAV25A0A0B4J276 109 aa8.8□□□□□ -1
USP3-202ENST00000380324 ADARB2-AS1A8MUL3 147 aa8.8□□□□□ -1
USP3-202ENST00000380324 OR11H12B2RN74 326 aa8.8□□□□□ -1
USP3-202ENST00000380324 ODF1Q14990 250 aa8.8□□□□□ -1
USP3-202ENST00000380324 STHQ8IWL8 128 aa8.8□□□□□ -1
USP3-202ENST00000380324 POM121L12Q8N7R1 296 aa8.8□□□□□ -1
USP3-202ENST00000380324 JMJD8Q96S16 334 aa8.8□□□□□ -1
USP3-202ENST00000380324 XCL2Q9UBD3 114 aa8.8□□□□□ -1
USP3-202ENST00000380324 NACAE9PAV3 2078 aa8.8□□□□□ -1
USP3-202ENST00000380324 NDUFA7O95182 113 aa8.8□□□□□ -1
USP3-202ENST00000380324 PPP1R17O96001 155 aa8.8□□□□□ -1
USP3-202ENST00000380324 INSP01308 110 aa8.8□□□□□ -1
USP3-202ENST00000380324 ORMDL2Q53FV1 153 aa8.8□□□□□ -1
USP3-202ENST00000380324 ANKRD39Q53RE8 183 aa8.8□□□□□ -1
USP3-202ENST00000380324 SLC25A34Q6PIV7 304 aa8.8□□□□□ -1
USP3-202ENST00000380324 ATP5LO75964 103 aa8.79□□□□□ -1
USP3-202ENST00000380324 CRYGDP07320 174 aa8.79□□□□□ -1
USP3-202ENST00000380324 MRPL52Q86TS9 123 aaKnown RBP8.79□□□□□ -1
USP3-202ENST00000380324 LINC01587Q99440 93 aa8.79□□□□□ -1
USP3-202ENST00000380324 IGHV3OR16-12A0A075B7B8 117 aa8.79□□□□□ -1
USP3-202ENST00000380324 WFDC10AQ9H1F0 79 aa8.79□□□□□ -1
USP3-202ENST00000380324 IGHV3-73A0A0B4J1V6 119 aa8.78□□□□□ -1
USP3-202ENST00000380324 HINT1P49773 126 aaPredicted RBP8.78□□□□□ -1
USP3-202ENST00000380324 TMEM208Q9BTX3 173 aa8.78□□□□□ -1
USP3-202ENST00000380324 SDHAF1A6NFY7 115 aa8.77□□□□□ -1
USP3-202ENST00000380324 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.77□□□□□ -1
USP3-202ENST00000380324 KRTAP10-3P60369 221 aa8.77□□□□□ -1
USP3-202ENST00000380324 ZNF415Q09FC8 603 aa8.77□□□□□ -1
USP3-202ENST00000380324 C2orf66Q6UXQ4 117 aa8.77□□□□□ -1
USP3-202ENST00000380324 TOMM6Q96B49 74 aa8.77□□□□□ -1.01
USP3-202ENST00000380324 SCGB3A1Q96QR1 104 aa8.77□□□□□ -1.01
USP3-202ENST00000380324 MRPS16Q9Y3D3 137 aaKnown RBP8.77□□□□□ -1.01
USP3-202ENST00000380324 M0QY20 66 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 NMUP48645 174 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 MRPL35Q9NZE8 188 aaKnown RBP8.76□□□□□ -1.01
USP3-202ENST00000380324 VWFP04275 2813 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 K7EMI3 77 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 IGKCP01834 107 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 COX8AP10176 69 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 NUTF2P61970 127 aaKnown RBP8.76□□□□□ -1.01
USP3-202ENST00000380324 MORN3Q6PF18 240 aaPredicted RBP8.76□□□□□ -1.01
USP3-202ENST00000380324 TRPT1Q86TN4 253 aaKnown RBP8.76□□□□□ -1.01
USP3-202ENST00000380324 KIR2DL4Q99706 377 aa8.76□□□□□ -1.01
USP3-202ENST00000380324 M0R2P5 195 aa8.75□□□□□ -1.01
USP3-202ENST00000380324 IGLV1-51P01701 117 aa8.75□□□□□ -1.01
USP3-202ENST00000380324 PF4P02776 101 aa8.75□□□□□ -1.01
USP3-202ENST00000380324 POLR2KP53803 58 aaKnown RBP8.75□□□□□ -1.01
USP3-202ENST00000380324 DPM2O94777 84 aa8.75□□□□□ -1.01
USP3-202ENST00000380324 MRPL16Q9NX20 251 aaKnown RBP8.75□□□□□ -1.01
USP3-202ENST00000380324 TP53TG1Q9Y2A0 90 aa8.75□□□□□ -1.01
USP3-202ENST00000380324 FLNBO75369 2602 aaKnown RBP8.74□□□□□ -1.01
USP3-202ENST00000380324 TENM1Q9UKZ4 2725 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 VCYO14598 125 aa8.74□□□□□ -1.01
USP3-202ENST00000380324 P0DMU3 169 aa8.74□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 1262 ms