RNA–Protein interactions for RNA: ENST00000380075.6

TRIM54-202, Transcript of tripartite motif containing 54, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRIM54, Length 1,967 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM54-202ENST00000380075 LINC01619G3V211 115 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 RPL32P62910 135 aaKnown RBP16.01■□□□□ 0.15
TRIM54-202ENST00000380075 TCTEX1D4Q5JR98 221 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 OR9G4Q8NGQ1 327 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 C4orf3Q8WVX3 66 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 PEMTQ9UBM1 199 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 KIF25-AS1Q9Y6Z4 181 aa16.01■□□□□ 0.15
TRIM54-202ENST00000380075 IGKCP01834 107 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 C2orf91Q6ZV80 131 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 SPRY2O43597 315 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 DPM2O94777 84 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 RIPPLY3P57055 190 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 C9orf85Q96MD7 179 aa16■□□□□ 0.15
TRIM54-202ENST00000380075 KRTAP24-1Q3LI83 254 aa15.99■□□□□ 0.15
TRIM54-202ENST00000380075 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP15.99■□□□□ 0.15
TRIM54-202ENST00000380075 COX11Q9Y6N1 276 aa15.99■□□□□ 0.15
TRIM54-202ENST00000380075 IGHV3-16A0A0C4DH30 117 aa15.98■□□□□ 0.15
TRIM54-202ENST00000380075 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP15.98■□□□□ 0.15
TRIM54-202ENST00000380075 LINC00315P59091 139 aa15.98■□□□□ 0.15
TRIM54-202ENST00000380075 ADAMTSL5Q6ZMM2 481 aa15.98■□□□□ 0.15
TRIM54-202ENST00000380075 SYT8Q8NBV8 401 aa15.98■□□□□ 0.15
TRIM54-202ENST00000380075 TOMM6Q96B49 74 aa15.98■□□□□ 0.15
TRIM54-202ENST00000380075 RPL39LQ96EH5 51 aaKnown RBP15.98■□□□□ 0.15
TRIM54-202ENST00000380075 IGHV1OR15-1A0A075B7D0 117 aa15.97■□□□□ 0.15
TRIM54-202ENST00000380075 TRAV12-1A0A0B4J245 112 aa15.97■□□□□ 0.15
TRIM54-202ENST00000380075 LINC01549A6NIU2 74 aa15.97■□□□□ 0.15
TRIM54-202ENST00000380075 HHLA3Q9XRX5 114 aa15.97■□□□□ 0.15
TRIM54-202ENST00000380075 A0A087WX48 190 aa15.96■□□□□ 0.15
TRIM54-202ENST00000380075 SLURP1P55000 103 aa15.96■□□□□ 0.15
TRIM54-202ENST00000380075 WFDC12Q8WWY7 111 aa15.96■□□□□ 0.15
TRIM54-202ENST00000380075 Q6ZSV7 163 aa15.96■□□□□ 0.15
TRIM54-202ENST00000380075 AMTNQ6UX39 209 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 OR11H1Q8NG94 326 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 A8MTW9 85 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 IGKV3-20P01619 116 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 HLA-DRB4P13762 266 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 PLNP26678 52 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 SPINK13Q1W4C9 94 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 HLA-DRB4X5D2U9 266 aa15.95■□□□□ 0.14
TRIM54-202ENST00000380075 TRAV12-2A0A075B6T6 113 aa15.94■□□□□ 0.14
TRIM54-202ENST00000380075 NMUP48645 174 aa15.94■□□□□ 0.14
TRIM54-202ENST00000380075 SEC11AP67812 179 aa15.94■□□□□ 0.14
TRIM54-202ENST00000380075 C18orf65Q6ZTR6 163 aa15.94■□□□□ 0.14
TRIM54-202ENST00000380075 TRGV11A0A075B6L2 103 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 DEFB136Q30KP8 78 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 TMEM97Q5BJF2 176 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 Q8N1Y9 231 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 SCGB3A1Q96QR1 104 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 CSTL1Q9H114 145 aa15.93■□□□□ 0.14
TRIM54-202ENST00000380075 SUMO4Q6EEV6 95 aa15.92■□□□□ 0.14
TRIM54-202ENST00000380075 MRPL35Q9NZE8 188 aaKnown RBP15.92■□□□□ 0.14
TRIM54-202ENST00000380075 H7C1H1 209 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 NDUFA7O95182 113 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 NPSP0C0P6 89 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 HSD52Q0P140 79 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 TRBV6-5A0A0K0K1A5 114 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 C2orf66Q6UXQ4 117 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 MDFICQ9P1T7 246 aa15.91■□□□□ 0.14
TRIM54-202ENST00000380075 F8VRH5 84 aa15.9■□□□□ 0.14
TRIM54-202ENST00000380075 POLR2KP53803 58 aaKnown RBP15.9■□□□□ 0.14
TRIM54-202ENST00000380075 ZC2HC1BQ5TFG8 222 aa15.9■□□□□ 0.14
TRIM54-202ENST00000380075 LINC01006Q8NI28 216 aa15.9■□□□□ 0.14
TRIM54-202ENST00000380075 VCYO14598 125 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 TAX1BP3O14907 124 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 DEFB131AP59861 70 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 KHDC1LQ5JSQ8 128 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 ERASQ7Z444 233 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 PCP2Q8IVA1 136 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 KLHL30-AS1Q8NEE0 82 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 C16orf95Q9H693 158 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 MUC4Q99102 2169 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 DYNLRB2Q8TF09 96 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 JPT2Q9H910 190 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 HIGD1BQ9P298 99 aa15.89■□□□□ 0.13
TRIM54-202ENST00000380075 A0A087WWL8 130 aa15.88■□□□□ 0.13
TRIM54-202ENST00000380075 F5H697 171 aa15.88■□□□□ 0.13
TRIM54-202ENST00000380075 NEXN-AS1Q8NBZ9 246 aa15.88■□□□□ 0.13
TRIM54-202ENST00000380075 MDFIQ99750 246 aa15.88■□□□□ 0.13
TRIM54-202ENST00000380075 COL6A5A8TX70 2615 aa15.88■□□□□ 0.13
TRIM54-202ENST00000380075 H3BMM0 161 aa15.87■□□□□ 0.13
TRIM54-202ENST00000380075 TMEM61Q8N0U2 210 aa15.87■□□□□ 0.13
TRIM54-202ENST00000380075 DLX4Q92988 240 aaPredicted RBP15.87■□□□□ 0.13
TRIM54-202ENST00000380075 KIR2DL4Q99706 377 aa15.87■□□□□ 0.13
TRIM54-202ENST00000380075 CYSLTR1Q9Y271 337 aa15.87■□□□□ 0.13
TRIM54-202ENST00000380075 KNCNA6PVL3 124 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 ZNF256Q9Y2P7 627 aaPredicted RBP15.86■□□□□ 0.13
TRIM54-202ENST00000380075 CHTOPQ9Y3Y2 248 aaKnown RBP15.86■□□□□ 0.13
TRIM54-202ENST00000380075 IGKV2D-26A0A0A0MRZ7 120 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 TRBV27A0A0K0K1C4 114 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 A6NDN8 102 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 TCTAP57738 103 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 UBE2V1Q13404 147 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 GTSCR1Q86UQ5 136 aa15.86■□□□□ 0.13
TRIM54-202ENST00000380075 CRYGDP07320 174 aa15.85■□□□□ 0.13
TRIM54-202ENST00000380075 CBY3A6NI87 242 aa15.84■□□□□ 0.13
TRIM54-202ENST00000380075 DEFB114Q30KQ6 69 aa15.84■□□□□ 0.13
TRIM54-202ENST00000380075 Q6ZVH6 145 aa15.84■□□□□ 0.13
TRIM54-202ENST00000380075 BAALCQ8WXS3 180 aa15.84■□□□□ 0.13
TRIM54-202ENST00000380075 SPAG8Q99932 426 aaPredicted RBP15.84■□□□□ 0.13
TRIM54-202ENST00000380075 SDHAF1A6NFY7 115 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms