RNA–Protein interactions for RNA: ENST00000379018.7

PDLIM4-202, Transcript of PDZ and LIM domain 4, humanhuman

TSL 1 (best) BASIC

Gene PDLIM4, Length 1,006 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-202ENST00000379018 UQCC3Q6UW78 93 aa11.59□□□□□ -0.55
PDLIM4-202ENST00000379018 PRNTQ86SH4 94 aa11.59□□□□□ -0.55
PDLIM4-202ENST00000379018 A0A087WWC5 75 aa11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 RAB19A4D1S5 217 aa11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 RPL12P30050 165 aaKnown RBP11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 HNRNPA3P51991 378 aaKnown RBP11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 NIT1Q86X76 327 aa11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 PSG8Q9UQ74 426 aa11.58□□□□□ -0.56
PDLIM4-202ENST00000379018 A8MWV9 139 aa11.57□□□□□ -0.56
PDLIM4-202ENST00000379018 TCRAP04437 139 aa11.57□□□□□ -0.56
PDLIM4-202ENST00000379018 ARL14EPLP0DKL9 152 aa11.57□□□□□ -0.56
PDLIM4-202ENST00000379018 SMUG1Q53HV7 270 aa11.57□□□□□ -0.56
PDLIM4-202ENST00000379018 A0A087WX48 190 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 K7EQM0 130 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 FGF8P55075 233 aaPredicted RBP11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 FAM74A4Q5TZK3 123 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 KCNIP4Q6PIL6 250 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 ZFP2Q6ZN57 461 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 ARL6IP6Q8N6S5 226 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 PTH2Q96A98 100 aa11.56□□□□□ -0.56
PDLIM4-202ENST00000379018 SEC11BP0C7V7 166 aa11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 FLI1Q01543 452 aaPredicted RBP11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 C5orf17Q8NAS9 161 aa11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 OR10G9Q8NGN4 311 aa11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 OR10G7Q8NGN6 311 aa11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 WFDC1Q9HC57 220 aa11.55□□□□□ -0.56
PDLIM4-202ENST00000379018 SERTM2A0A1B0GWG4 89 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 IGLV2-11P01706 119 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 ASIPP42127 132 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 SULT1A2P50226 295 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 DMRTA1Q5VZB9 504 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 OR2G3Q8NGZ4 309 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 DAZAP1Q96EP5 407 aaKnown RBP11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 LINC00479Q96M42 142 aa11.54□□□□□ -0.56
PDLIM4-202ENST00000379018 TEX46H3BTG2 121 aa11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 H3BVH4 76 aa11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 CDC34P49427 236 aaPredicted RBP11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 RAB5CP51148 216 aa11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 LYPD6BQ8NI32 183 aa11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 C1orf43Q9BWL3 253 aa11.53□□□□□ -0.56
PDLIM4-202ENST00000379018 A0A087WWL8 130 aa11.52□□□□□ -0.57
PDLIM4-202ENST00000379018 BORCS7-ASMTA0A0B4J1R7 106 aa11.52□□□□□ -0.57
PDLIM4-202ENST00000379018 IGKV3D-20A0A0C4DH25 116 aa11.52□□□□□ -0.57
PDLIM4-202ENST00000379018 HLA-DQA1P01909 254 aa11.52□□□□□ -0.57
PDLIM4-202ENST00000379018 C14orf177Q52M58 125 aa11.52□□□□□ -0.57
PDLIM4-202ENST00000379018 TRAV34A0A0B4J273 112 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 TMEM262E9PQX1 116 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 CRPP02741 224 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 SUMO1P63165 101 aaKnown RBP11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 BLOC1S1P78537 153 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 ELOBQ15370 118 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 UFSP1Q6NVU6 142 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 C15orf54Q8N8G6 183 aa11.51□□□□□ -0.57
PDLIM4-202ENST00000379018 GCHFRP30047 84 aa11.5□□□□□ -0.57
PDLIM4-202ENST00000379018 RPL7L1Q6DKI1 246 aaKnown RBP11.5□□□□□ -0.57
PDLIM4-202ENST00000379018 B4DEV8 164 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 USP17L23D6RBM5 183 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 M0R036 132 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 RHODO00212 210 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 Q0VG73 95 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 SAPCD1Q5SSQ6 148 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 EPDR1Q9UM22 224 aa11.49□□□□□ -0.57
PDLIM4-202ENST00000379018 GRIFINA4D1Z8 144 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 STAG3L2P0CL84 134 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 STAG3L3P0CL85 134 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 HSD17B11Q8NBQ5 300 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 RAB24Q969Q5 203 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 ARL2-SNX15V9GYD0 113 aa11.48□□□□□ -0.57
PDLIM4-202ENST00000379018 UMAD1C9J7I0 102 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 ARMS2P0C7Q2 107 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 PIK3CD-AS1Q5SR53 167 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 C10orf91Q5T1B1 145 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 ATRAIDQ6UW56 229 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 CHCHD7Q9BUK0 85 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 IL36BQ9NZH7 164 aa11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.47□□□□□ -0.57
PDLIM4-202ENST00000379018 FABP5P3A8MUU1 101 aa11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 M0R381 172 aa11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 ANGP03950 147 aaKnown RBP11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 RPL36AP83881 106 aaKnown RBP11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 ENHOQ6UWT2 76 aa11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 RPL36ALQ969Q0 106 aaKnown RBP11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 SMDT1Q9H4I9 107 aa11.46□□□□□ -0.57
PDLIM4-202ENST00000379018 TMSB15BA0A087X1C1 80 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 PRSS1P07477 247 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 MT1HL1P0DM35 61 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 MPV17L2Q567V2 206 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 CLPSL2Q6UWE3 100 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 PHLDA3Q9Y5J5 127 aa11.45□□□□□ -0.58
PDLIM4-202ENST00000379018 PANO1I0J062 215 aa11.44□□□□□ -0.58
PDLIM4-202ENST00000379018 ZC2HC1AQ96GY0 325 aa11.44□□□□□ -0.58
PDLIM4-202ENST00000379018 TMEM167BQ9NRX6 74 aa11.44□□□□□ -0.58
PDLIM4-202ENST00000379018 CARHSP1Q9Y2V2 147 aaKnown RBP11.44□□□□□ -0.58
PDLIM4-202ENST00000379018 UBE2G2P60604 165 aa11.43□□□□□ -0.58
PDLIM4-202ENST00000379018 UBE2D3P61077 147 aa11.43□□□□□ -0.58
PDLIM4-202ENST00000379018 UBE2D2P62837 147 aa11.43□□□□□ -0.58
PDLIM4-202ENST00000379018 Q86TA4 180 aa11.43□□□□□ -0.58
PDLIM4-202ENST00000379018 CHCHD5Q9BSY4 110 aa11.43□□□□□ -0.58
PDLIM4-202ENST00000379018 TRBV7-3A0A075B6L6 115 aa11.42□□□□□ -0.58
PDLIM4-202ENST00000379018 TMEM218A2RU14 115 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms