RNA–Protein interactions for RNA: ENST00000378633.5

CDK11A-205, Transcript of cyclin dependent kinase 11A, humanhuman

TSL 1 (best) BASIC

Gene CDK11A, Length 2,458 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK11A-205ENST00000378633 SYNJ2BPP57105 145 aa13.92□□□□□ -0.18
CDK11A-205ENST00000378633 PRADC1Q9BSG0 188 aa13.92□□□□□ -0.18
CDK11A-205ENST00000378633 MDFICQ9P1T7 246 aa13.92□□□□□ -0.18
CDK11A-205ENST00000378633 IGSF10Q6WRI0 2623 aa13.92□□□□□ -0.18
CDK11A-205ENST00000378633 CACNA1AO00555 2505 aa13.92□□□□□ -0.18
CDK11A-205ENST00000378633 TGFAP01135 160 aa13.91□□□□□ -0.18
CDK11A-205ENST00000378633 KIR2DL4Q99706 377 aa13.91□□□□□ -0.18
CDK11A-205ENST00000378633 LGALS1P09382 135 aaKnown RBP13.91□□□□□ -0.18
CDK11A-205ENST00000378633 C12orf74Q32Q52 190 aa13.91□□□□□ -0.18
CDK11A-205ENST00000378633 CRYBG3Q68DQ2 2970 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 SDHAF1A6NFY7 115 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 Q8N1Y9 231 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 MAPK1IP1LQ8NDC0 245 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 DEFB104AQ8WTQ1 72 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 AGRNO00468 2067 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 IGLL5B9A064 214 aa13.9□□□□□ -0.18
CDK11A-205ENST00000378633 TRBV27A0A0K0K1C4 114 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 FAM74A4Q5TZK3 123 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 VPREB3Q9UKI3 123 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 IGLV4-69A0A075B6H9 119 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 RPL39P62891 51 aaKnown RBP13.89□□□□□ -0.19
CDK11A-205ENST00000378633 SPINK13Q1W4C9 94 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 SYT8Q8NBV8 401 aa13.89□□□□□ -0.19
CDK11A-205ENST00000378633 IGHV1OR15-1A0A075B7D0 117 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 RIPPLY3P57055 190 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 C11orf86A6NJI1 115 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 ELANEP08246 267 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 COX6B1P14854 86 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 PMVKQ15126 192 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 TMEM141Q96I45 108 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 TIMM17AQ99595 171 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 CSMD2Q7Z408 3487 aa13.88□□□□□ -0.19
CDK11A-205ENST00000378633 DUX5Q96PT3 197 aa13.87□□□□□ -0.19
CDK11A-205ENST00000378633 UTP20O75691 2785 aaKnown RBP13.87□□□□□ -0.19
CDK11A-205ENST00000378633 A0A1B0GWB2 263 aa13.87□□□□□ -0.19
CDK11A-205ENST00000378633 ZNF815PA8K554 130 aa13.87□□□□□ -0.19
CDK11A-205ENST00000378633 HOXD3P31249 432 aaPredicted RBP13.87□□□□□ -0.19
CDK11A-205ENST00000378633 MORN3Q6PF18 240 aaPredicted RBP13.87□□□□□ -0.19
CDK11A-205ENST00000378633 ZNF702PQ9H963 129 aa13.87□□□□□ -0.19
CDK11A-205ENST00000378633 M0QY20 66 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 PAPPA-AS1Q5QFB9 102 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 ZNF479Q96JC4 524 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 UBE2E2Q96LR5 201 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 ZNF56Q15929 161 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 CD300EQ496F6 205 aaPredicted RBP13.86□□□□□ -0.19
CDK11A-205ENST00000378633 Q6YL49 198 aa13.86□□□□□ -0.19
CDK11A-205ENST00000378633 G3V4G9 280 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 FSHBP01225 129 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 SCGB2A2Q13296 93 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 EMP1P54849 157 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 AMTNQ6UX39 209 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 FOXI2Q6ZQN5 318 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 RNF152Q8N8N0 203 aa13.85□□□□□ -0.19
CDK11A-205ENST00000378633 ZNF256Q9Y2P7 627 aaPredicted RBP13.84□□□□□ -0.19
CDK11A-205ENST00000378633 PLEKHB2Q96CS7 222 aa13.84□□□□□ -0.19
CDK11A-205ENST00000378633 KLHL30-AS1Q8NEE0 82 aa13.83□□□□□ -0.2
CDK11A-205ENST00000378633 USP9YO00507 2555 aaPredicted RBP13.83□□□□□ -0.2
CDK11A-205ENST00000378633 HERVK_113P61574 105 aa13.83□□□□□ -0.2
CDK11A-205ENST00000378633 RRN3P1Q2M238 152 aa13.83□□□□□ -0.2
CDK11A-205ENST00000378633 SCGB1D4Q6XE38 83 aa13.83□□□□□ -0.2
CDK11A-205ENST00000378633 TRPT1Q86TN4 253 aaKnown RBP13.83□□□□□ -0.2
CDK11A-205ENST00000378633 ZNF876PQ49A33 203 aa13.82□□□□□ -0.2
CDK11A-205ENST00000378633 DOPEY2Q9Y3R5 2298 aa13.82□□□□□ -0.2
CDK11A-205ENST00000378633 NSUN5P1Q3KNT7 163 aa13.82□□□□□ -0.2
CDK11A-205ENST00000378633 BEX4Q9NWD9 120 aaPredicted RBP13.82□□□□□ -0.2
CDK11A-205ENST00000378633 MYO18BQ8IUG5 2567 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 FBN2P35556 2912 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 HOXA3O43365 443 aaPredicted RBP13.81□□□□□ -0.2
CDK11A-205ENST00000378633 IGHV4-31P0DP07 118 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 RHOHQ15669 191 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 TCTEX1D4Q5JR98 221 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 ANKRD17O75179 2603 aaKnown RBP13.81□□□□□ -0.2
CDK11A-205ENST00000378633 TRGV11A0A075B6L2 103 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 ZNRF2Q8NHG8 242 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 ZANQ9Y493 2812 aa13.81□□□□□ -0.2
CDK11A-205ENST00000378633 RBMY1A1P0DJD3 496 aaKnown RBP13.79□□□□□ -0.2
CDK11A-205ENST00000378633 RBMY1CP0DJD4 496 aa13.79□□□□□ -0.2
CDK11A-205ENST00000378633 RBMY1FQ15415 496 aaKnown RBP13.79□□□□□ -0.2
CDK11A-205ENST00000378633 P0DMU3 169 aa13.79□□□□□ -0.2
CDK11A-205ENST00000378633 FAM231AP0DMU4 169 aa13.79□□□□□ -0.2
CDK11A-205ENST00000378633 FAM231CP0DMU5 169 aa13.79□□□□□ -0.2
CDK11A-205ENST00000378633 SRSF9Q13242 221 aaKnown RBP eCLIP13.79□□□□□ -0.2
CDK11A-205ENST00000378633 TMEM170BQ5T4T1 132 aa13.79□□□□□ -0.2
CDK11A-205ENST00000378633 SLURP1P55000 103 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 SORL1Q92673 2214 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 A0A0J9YY99 117 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 TMEM238LA0A1B0GVL6 79 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 A6NJY4 79 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 KNCNA6PVL3 124 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 F8W1H4 67 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 PRB1P04280 392 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 TSPEAR-AS2P59090 65 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 C18orf65Q6ZTR6 163 aa13.78□□□□□ -0.2
CDK11A-205ENST00000378633 ACACBO00763 2458 aa13.77□□□□□ -0.2
CDK11A-205ENST00000378633 H3BMG7 143 aa13.77□□□□□ -0.21
CDK11A-205ENST00000378633 RPL24P83731 157 aaKnown RBP13.77□□□□□ -0.21
CDK11A-205ENST00000378633 DEFB136Q30KP8 78 aa13.77□□□□□ -0.21
CDK11A-205ENST00000378633 OPRPNQ99935 248 aaPredicted RBP13.77□□□□□ -0.21
CDK11A-205ENST00000378633 I3L3M4 83 aa13.76□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms