RNA–Protein interactions for RNA: ENST00000377797.7

TCOF1-202, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene TCOF1, Length 5,095 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-202ENST00000377797 SMAD5-AS1Q9Y6J3 95 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 CD5LO43866 347 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 ZNF747Q9BV97 191 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 U3KQE9 123 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 IGLL1P15814 213 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 Q6ZSV7 163 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 MRPL52Q86TS9 123 aaKnown RBP11.03□□□□□ -0.64
TCOF1-202ENST00000377797 Q8N1Y9 231 aa11.03□□□□□ -0.64
TCOF1-202ENST00000377797 TRAV2A0A0B4J234 112 aa11.02□□□□□ -0.64
TCOF1-202ENST00000377797 MRPS16Q9Y3D3 137 aaKnown RBP11.02□□□□□ -0.65
TCOF1-202ENST00000377797 LGALS9BQ3B8N2 356 aa11.02□□□□□ -0.65
TCOF1-202ENST00000377797 LGALS9CQ6DKI2 356 aa11.02□□□□□ -0.65
TCOF1-202ENST00000377797 OR13C6PQ8NH95 151 aa11.02□□□□□ -0.65
TCOF1-202ENST00000377797 IGLC3P0DOY3 106 aa11.01□□□□□ -0.65
TCOF1-202ENST00000377797 SRSF2Q01130 221 aaKnown RBP11.01□□□□□ -0.65
TCOF1-202ENST00000377797 ZNF493Q6ZR52 646 aa11.01□□□□□ -0.65
TCOF1-202ENST00000377797 MRPL35Q9NZE8 188 aaKnown RBP11.01□□□□□ -0.65
TCOF1-202ENST00000377797 PSMB8P28062 276 aa11.01□□□□□ -0.65
TCOF1-202ENST00000377797 MBD6Q96DN6 1003 aa11.01□□□□□ -0.65
TCOF1-202ENST00000377797 RPL39LQ96EH5 51 aaKnown RBP11.01□□□□□ -0.65
TCOF1-202ENST00000377797 NOP10Q9NPE3 64 aaKnown RBP11.01□□□□□ -0.65
TCOF1-202ENST00000377797 PRSS47A8MTI9 375 aa11.01□□□□□ -0.65
TCOF1-202ENST00000377797 CFAP54Q96N23 3096 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 APOC4P55056 127 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 FLNBO75369 2602 aaKnown RBP11□□□□□ -0.65
TCOF1-202ENST00000377797 MALP21145 153 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 DAD1P61803 113 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 PMVKQ15126 192 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 TRAV25A0A0B4J276 109 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 CFAP161Q6P656 301 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 PLEKHB2Q96CS7 222 aa11□□□□□ -0.65
TCOF1-202ENST00000377797 A0A1B0GXF2 115 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 CHAC1Q9BUX1 264 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 LINC00173Q6ZV60 143 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 TMEM141Q96I45 108 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 ZNF702PQ9H963 129 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 F5H768 121 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 K7EQG2 157 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 C9orf66Q5T8R8 295 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 ADAMTSL5Q6ZMM2 481 aa10.99□□□□□ -0.65
TCOF1-202ENST00000377797 LGALS9O00182 355 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 C20orf173Q96LM9 149 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 PSMG3-AS1Q96PY0 264 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 ANAPC13Q9BS18 74 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 DKK2Q9UBU2 259 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 F8VRH5 84 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 RNF152Q8N8N0 203 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 VPS13AQ96RL7 3174 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 CRIP1P50238 77 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 GDF5OSQ5U4N7 250 aa10.98□□□□□ -0.65
TCOF1-202ENST00000377797 INAFM1C9JVW0 142 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 HIST2H2BDQ6DRA6 164 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 SUMO4Q6EEV6 95 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 IGLV1-40P01703 118 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 YPEL4Q96NS1 127 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 CRPP02741 224 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 MDFICQ9P1T7 246 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 TRBV7-9A0A0J9YWB2 115 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 IGLV2-11P01706 119 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 TIMM21Q9BVV7 248 aa10.97□□□□□ -0.65
TCOF1-202ENST00000377797 HLA-DRB4P13762 266 aa10.96□□□□□ -0.65
TCOF1-202ENST00000377797 HLA-DRB4X5D2U9 266 aa10.96□□□□□ -0.65
TCOF1-202ENST00000377797 TRBV25-1A0A075B6N4 114 aa10.96□□□□□ -0.66
TCOF1-202ENST00000377797 ESDP10768 282 aa10.96□□□□□ -0.66
TCOF1-202ENST00000377797 COX11Q9Y6N1 276 aa10.96□□□□□ -0.66
TCOF1-202ENST00000377797 MAP6D1Q9H9H5 199 aa10.96□□□□□ -0.66
TCOF1-202ENST00000377797 LAMA1P25391 3075 aa10.96□□□□□ -0.66
TCOF1-202ENST00000377797 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 MRGPRG-AS1Q2M3A8 158 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 TET2Q6N021 2002 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-202ENST00000377797 MORN3Q6PF18 240 aaPredicted RBP10.95□□□□□ -0.66
TCOF1-202ENST00000377797 RASL10AQ92737 203 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 CENPEQ02224 2701 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 IGLC6P0CF74 106 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 JPT2Q9H910 190 aa10.95□□□□□ -0.66
TCOF1-202ENST00000377797 K7EMI3 77 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 DEFB114Q30KQ6 69 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 PIFOQ8TCI5 191 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 TMEM243Q9BU79 118 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 KIR3DS1Q14943 382 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 TDRG1Q3Y452 100 aa10.94□□□□□ -0.66
TCOF1-202ENST00000377797 PRSS29PA6NIE9 313 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 GTSF1LQ9H1H1 148 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 F8W735 103 aaPredicted RBP10.93□□□□□ -0.66
TCOF1-202ENST00000377797 COX8AP10176 69 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 NPC2P61916 151 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 OCIAD2Q56VL3 154 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 ZFAND2AQ8N6M9 145 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 C11orf68Q9H3H3 251 aaKnown RBP10.93□□□□□ -0.66
TCOF1-202ENST00000377797 LINC00158P58513 81 aa10.93□□□□□ -0.66
TCOF1-202ENST00000377797 RNASE13Q5GAN3 156 aaKnown RBP10.93□□□□□ -0.66
TCOF1-202ENST00000377797 CKS1BP61024 79 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 GAGE6Q13070 117 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 LY6G6DO95868 133 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 RHOHQ15669 191 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 LINC01006Q8NI28 216 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 A0A096LPF7 62 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 H3BMM0 161 aa10.92□□□□□ -0.66
TCOF1-202ENST00000377797 PRIMA1Q86XR5 153 aa10.92□□□□□ -0.66
Retrieved 100 of 20,778 RNA–protein pairs in 109.1 ms