RNA–Protein interactions for RNA: ENST00000377344.6

CBWD3-203, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 1,813 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-203ENST00000377344 RASL11AQ6T310 242 aa9.23□□□□□ -0.93
CBWD3-203ENST00000377344 OR4C5Q8NGB2 326 aa9.23□□□□□ -0.93
CBWD3-203ENST00000377344 SAMD10Q9BYL1 202 aa9.23□□□□□ -0.93
CBWD3-203ENST00000377344 TEX48A0A1B0GUV7 120 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 MGPP08493 103 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 CFAP126Q5VTH2 177 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 NDUFAF3Q9BU61 184 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 TMEM191AQ9H0A3 160 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 DPH3P1Q9H4G8 78 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 TENM3Q9P273 2699 aa9.22□□□□□ -0.93
CBWD3-203ENST00000377344 F5H697 171 aa9.21□□□□□ -0.93
CBWD3-203ENST00000377344 RPS10P46783 165 aaKnown RBP9.21□□□□□ -0.93
CBWD3-203ENST00000377344 TMEM136Q6ZRR5 245 aa9.21□□□□□ -0.93
CBWD3-203ENST00000377344 AMN1Q8IY45 258 aa9.21□□□□□ -0.93
CBWD3-203ENST00000377344 FRZBQ92765 325 aa9.21□□□□□ -0.93
CBWD3-203ENST00000377344 TRAV4A0A0B4J268 109 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 RS1O15537 224 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 CRYGDP07320 174 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 RAB5AP20339 215 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 COX19Q49B96 90 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 POM121L12Q8N7R1 296 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 ZNF479Q96JC4 524 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 GNB1LQ9BYB4 327 aa9.21□□□□□ -0.94
CBWD3-203ENST00000377344 HLA-DQA1P01909 254 aa9.2□□□□□ -0.94
CBWD3-203ENST00000377344 ZNF56Q15929 161 aa9.2□□□□□ -0.94
CBWD3-203ENST00000377344 LINC00612Q8N6U2 182 aa9.2□□□□□ -0.94
CBWD3-203ENST00000377344 C11orf45Q8TAV5 145 aa9.2□□□□□ -0.94
CBWD3-203ENST00000377344 TRAPPC1Q9Y5R8 145 aa9.2□□□□□ -0.94
CBWD3-203ENST00000377344 FAM104BQ5XKR9 115 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 KIF25-AS1Q9Y6Z4 181 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 HUWE1Q7Z6Z7 4374 aaKnown RBP9.19□□□□□ -0.94
CBWD3-203ENST00000377344 COL7A1Q02388 2944 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 DNAH9Q9NYC9 4486 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 RHODO00212 210 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 APCSP02743 223 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 MT-ND6P03923 174 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 HTN3P15516 51 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 FABP9Q0Z7S8 132 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 SLAQ13239 276 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 GATD1Q8NB37 220 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 MRPL18Q9H0U6 180 aaKnown RBP9.19□□□□□ -0.94
CBWD3-203ENST00000377344 U3KQK5 164 aa9.19□□□□□ -0.94
CBWD3-203ENST00000377344 PRKDCP78527 4128 aaKnown RBP9.19□□□□□ -0.94
CBWD3-203ENST00000377344 TRAV26-2A0A0B4J265 109 aa9.18□□□□□ -0.94
CBWD3-203ENST00000377344 TRGV4A0A0C4DH28 118 aa9.18□□□□□ -0.94
CBWD3-203ENST00000377344 RAB4AP20338 218 aa9.18□□□□□ -0.94
CBWD3-203ENST00000377344 NANOS2P60321 138 aaKnown RBP9.18□□□□□ -0.94
CBWD3-203ENST00000377344 C12orf74Q32Q52 190 aa9.18□□□□□ -0.94
CBWD3-203ENST00000377344 ATP5G1P05496 136 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 KIAA1644Q3SXP7 199 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 UFSP1Q6NVU6 142 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 ZFP2Q6ZN57 461 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 RNF185Q96GF1 192 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 C18orf15Q96N68 181 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 LINC00315P59091 139 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 MRPL51Q4U2R6 128 aaKnown RBP9.17□□□□□ -0.94
CBWD3-203ENST00000377344 Q6ZTC4 211 aa9.17□□□□□ -0.94
CBWD3-203ENST00000377344 SMKR1H3BMG3 65 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 CIDEAO60543 219 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 NCR2O95944 276 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 TRGC2P03986 189 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 CKS2P33552 79 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 SUMO4Q6EEV6 95 aa9.16□□□□□ -0.94
CBWD3-203ENST00000377344 NACAE9PAV3 2078 aa9.15□□□□□ -0.94
CBWD3-203ENST00000377344 D6R8Y8 96 aa9.15□□□□□ -0.94
CBWD3-203ENST00000377344 F5H768 121 aa9.15□□□□□ -0.94
CBWD3-203ENST00000377344 FHL2Q14192 279 aa9.15□□□□□ -0.94
CBWD3-203ENST00000377344 Q6ZSN1 163 aa9.15□□□□□ -0.94
CBWD3-203ENST00000377344 HOXA5P20719 270 aa9.15□□□□□ -0.95
CBWD3-203ENST00000377344 MRAP2Q96G30 205 aa9.15□□□□□ -0.95
CBWD3-203ENST00000377344 ORMDL3Q8N138 153 aa9.14□□□□□ -0.95
CBWD3-203ENST00000377344 HHLA3Q9XRX5 114 aa9.14□□□□□ -0.95
CBWD3-203ENST00000377344 FBN3Q75N90 2809 aa9.14□□□□□ -0.95
CBWD3-203ENST00000377344 H7C1H1 209 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 GAS8-AS1O95177 125 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 P0DMU3 169 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 FAM231AP0DMU4 169 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 FAM231CP0DMU5 169 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 GATA1P15976 413 aaPredicted RBP9.13□□□□□ -0.95
CBWD3-203ENST00000377344 SLC25A29Q8N8R3 303 aa9.13□□□□□ -0.95
CBWD3-203ENST00000377344 K7EQD1 137 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 M0QY20 66 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 PPBPP02775 128 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 RPL39LQ96EH5 51 aaKnown RBP9.12□□□□□ -0.95
CBWD3-203ENST00000377344 PRELID3AQ96N28 172 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 EDA2RQ9HAV5 297 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 PRO0255Q9UI72 69 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 DEFB131BA0A096LNP1 70 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 A0A0J9YY99 117 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 SRIP30626 198 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 OR10J3Q5JRS4 329 aa9.12□□□□□ -0.95
CBWD3-203ENST00000377344 TRAV26-1A0A087WT03 109 aa9.11□□□□□ -0.95
CBWD3-203ENST00000377344 TRBV6-4A0A1B0GX49 114 aa9.11□□□□□ -0.95
CBWD3-203ENST00000377344 PAX4O43316 350 aa9.11□□□□□ -0.95
CBWD3-203ENST00000377344 RHOHQ15669 191 aa9.11□□□□□ -0.95
CBWD3-203ENST00000377344 PRADC1Q9BSG0 188 aa9.11□□□□□ -0.95
CBWD3-203ENST00000377344 TNFRSF6BO95407 300 aa9.1□□□□□ -0.95
CBWD3-203ENST00000377344 NPYP01303 97 aa9.1□□□□□ -0.95
CBWD3-203ENST00000377344 CRYBA4P53673 196 aa9.1□□□□□ -0.95
CBWD3-203ENST00000377344 ALKBH7Q9BT30 221 aaPredicted RBP9.1□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms