RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 ABCA12Q86UK0 2595 aa11.87□□□□□ -0.51
SSH3-203ENST00000376757 SONP18583 2426 aaKnown RBP11.87□□□□□ -0.51
SSH3-203ENST00000376757 TRAV12-1A0A0B4J245 112 aa11.87□□□□□ -0.51
SSH3-203ENST00000376757 C9orf139Q6ZV77 190 aa11.87□□□□□ -0.51
SSH3-203ENST00000376757 U3KQE9 123 aa11.87□□□□□ -0.51
SSH3-203ENST00000376757 IGHV4-4A0A075B6R2 117 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 CD7P09564 240 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 C1orf122Q6ZSJ8 110 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 JMJD1CQ15652 2540 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 LMO4P61968 165 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 TAL2Q16559 108 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 CLUHP3Q96NS8 147 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 KIR2DL4Q99706 377 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 RHPN1-AS1Q9BWJ2 59 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 ZNF580Q9UK33 172 aa11.86□□□□□ -0.51
SSH3-203ENST00000376757 ADARB2-AS1A8MUL3 147 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 IGHV4-38-2P0DP08 117 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 IGLV4-69A0A075B6H9 119 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 SCGB1C2P0DMR2 95 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 FBXL19-AS1Q494R0 122 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 SUMO4Q6EEV6 95 aa11.85□□□□□ -0.51
SSH3-203ENST00000376757 PRSS47A8MTI9 375 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 MT-ATP8P03928 68 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 FOXI1Q12951 378 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 LY6DQ14210 128 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 PSMG4Q5JS54 123 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 ZNRF2Q8NHG8 242 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 KLK9Q9UKQ9 250 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 PKD1L2Q7Z442 2459 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 EPG5Q9HCE0 2579 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 NF1P21359 2839 aa11.84□□□□□ -0.51
SSH3-203ENST00000376757 DLX4Q92988 240 aaPredicted RBP11.84□□□□□ -0.51
SSH3-203ENST00000376757 TCL1BO95988 128 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 ZNF688P0C7X2 276 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 C10orf99Q6UWK7 81 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 LRRK2Q5S007 2527 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 IGHV3-73A0A0B4J1V6 119 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 SDHAF1A6NFY7 115 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 COX6B1P14854 86 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 CFAP126Q5VTH2 177 aa11.83□□□□□ -0.52
SSH3-203ENST00000376757 H3BUX3 64 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 CIDEAO60543 219 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 PRM2P04554 102 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 CKS1BP61024 79 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 RNASE13Q5GAN3 156 aaKnown RBP11.82□□□□□ -0.52
SSH3-203ENST00000376757 FAM159AQ6UWV7 190 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 BEX4Q9NWD9 120 aaPredicted RBP11.82□□□□□ -0.52
SSH3-203ENST00000376757 MDFICQ9P1T7 246 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 A0A0J9YY99 117 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 ATP6V0BQ99437 205 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 SPATA25Q9BR10 227 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 MOB4Q9Y3A3 225 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 SOCS3O14543 225 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 ZNF56Q15929 161 aa11.82□□□□□ -0.52
SSH3-203ENST00000376757 MRPL53Q96EL3 112 aaKnown RBP11.82□□□□□ -0.52
SSH3-203ENST00000376757 C19orf84I3L1E1 186 aa11.81□□□□□ -0.52
SSH3-203ENST00000376757 DUX5Q96PT3 197 aa11.81□□□□□ -0.52
SSH3-203ENST00000376757 CHD6Q8TD26 2715 aa11.81□□□□□ -0.52
SSH3-203ENST00000376757 CRIP2P52943 208 aaPredicted RBP11.81□□□□□ -0.52
SSH3-203ENST00000376757 LINC00315P59091 139 aa11.81□□□□□ -0.52
SSH3-203ENST00000376757 TRPT1Q86TN4 253 aaKnown RBP11.81□□□□□ -0.52
SSH3-203ENST00000376757 NDUFA11Q86Y39 141 aa11.81□□□□□ -0.52
SSH3-203ENST00000376757 TRAV2A0A0B4J234 112 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 CFC1BP0CG36 223 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 CFC1P0CG37 223 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 C1QTNF4Q9BXJ3 329 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 OVOL1O14753 267 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 SPINK8P0C7L1 97 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 CDIP1Q9H305 208 aa11.8□□□□□ -0.52
SSH3-203ENST00000376757 TMEM238LA0A1B0GVL6 79 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 A6NJY4 79 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 UBE2D1P51668 147 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 XGP55808 180 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 NPC2P61916 151 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 CARD19Q96LW7 228 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 IGIPA6NJ69 53 aa11.79□□□□□ -0.52
SSH3-203ENST00000376757 PRRC2AP48634 2157 aaKnown RBP11.78□□□□□ -0.52
SSH3-203ENST00000376757 PMVKQ15126 192 aa11.78□□□□□ -0.52
SSH3-203ENST00000376757 CEMP1Q6PRD7 247 aaPredicted RBP11.78□□□□□ -0.52
SSH3-203ENST00000376757 KIF25-AS1Q9Y6Z4 181 aa11.78□□□□□ -0.52
SSH3-203ENST00000376757 ANKRD17O75179 2603 aaKnown RBP11.78□□□□□ -0.52
SSH3-203ENST00000376757 NAV2Q8IVL1 2488 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 TRAV26-1A0A087WT03 109 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 IGHV4-61A0A0C4DH41 118 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 P0DMU3 169 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 FAM231AP0DMU4 169 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 FAM231CP0DMU5 169 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 SPINK13Q1W4C9 94 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 HIST2H2BDQ6DRA6 164 aa11.77□□□□□ -0.52
SSH3-203ENST00000376757 CCDC168Q8NDH2 2452 aa11.77□□□□□ -0.53
SSH3-203ENST00000376757 TEX15Q9BXT5 2789 aa11.77□□□□□ -0.53
SSH3-203ENST00000376757 A0A1B0GV72 72 aa11.77□□□□□ -0.53
SSH3-203ENST00000376757 NDUFA4O00483 81 aa11.77□□□□□ -0.53
SSH3-203ENST00000376757 A4D1N5 150 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 ELANEP08246 267 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 HERVK_113P61574 105 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 FAM223BA6NKX1 122 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 J3QQQ9 107 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 IGHV3-30P01768 117 aa11.76□□□□□ -0.53
SSH3-203ENST00000376757 IGHV3-30-5P0DP03 117 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 71 ms