RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 MAP1LC3B2A6NCE7 125 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 RNF222A6NCQ9 220 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 SH2D1AO60880 128 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 S100A9P06702 114 aaKnown RBP9.79□□□□□ -0.84
HDAC6-204ENST00000376643 PKIAP61925 76 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 Q0VG73 95 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 DMRTA1Q5VZB9 504 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 SFRP2Q96HF1 295 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 MAP1LC3BQ9GZQ8 125 aa9.79□□□□□ -0.84
HDAC6-204ENST00000376643 M0R036 132 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 ZNF726P1Q15940 193 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 LINC01559Q495D7 138 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 C14orf177Q52M58 125 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 DAZ4Q86SG3 579 aaKnown RBP9.78□□□□□ -0.84
HDAC6-204ENST00000376643 NIT1Q86X76 327 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 C14orf178Q8N769 122 aaPredicted RBP9.78□□□□□ -0.84
HDAC6-204ENST00000376643 ZC2HC1AQ96GY0 325 aa9.78□□□□□ -0.84
HDAC6-204ENST00000376643 DAZ3Q9NR90 486 aaKnown RBP9.78□□□□□ -0.84
HDAC6-204ENST00000376643 J3QL48 77 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 AKR1C3P42330 323 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 ZNF674Q2M3X9 581 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 CST9LP1Q5W188 147 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 Q6ZSA8 131 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 SAMD10Q9BYL1 202 aa9.77□□□□□ -0.85
HDAC6-204ENST00000376643 TRBV7-3A0A075B6L6 115 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 IGKV2D-24A0A075B6R9 120 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 RBFOX3A6NFN3 312 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 M0R381 172 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 LTAP01374 205 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 Q5BKY6 102 aa9.76□□□□□ -0.85
HDAC6-204ENST00000376643 IGLV2-33A0A075B6J2 118 aaPredicted RBP9.75□□□□□ -0.85
HDAC6-204ENST00000376643 CXCL1P09341 107 aa9.75□□□□□ -0.85
HDAC6-204ENST00000376643 HAMPP81172 84 aa9.75□□□□□ -0.85
HDAC6-204ENST00000376643 TMEM97Q5BJF2 176 aa9.75□□□□□ -0.85
HDAC6-204ENST00000376643 DEFB104AQ8WTQ1 72 aa9.75□□□□□ -0.85
HDAC6-204ENST00000376643 JPT2Q9H910 190 aa9.75□□□□□ -0.85
HDAC6-204ENST00000376643 A0A087WWL8 130 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 GRIFINA4D1Z8 144 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 UMAD1C9J7I0 102 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 ARPC5O15511 151 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 PFDN1O60925 122 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 CRPP02741 224 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 CRIP1P50238 77 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 RAB4BP61018 213 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 RGS21Q2M5E4 152 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 LINC00528Q8N1L1 170 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 OR10G8Q8NGN5 311 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 BAALCQ8WXS3 180 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 UBE2WQ96B02 151 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 C1orf43Q9BWL3 253 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 FAM30AQ9NZY2 134 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 KLK12Q9UKR0 248 aa9.74□□□□□ -0.85
HDAC6-204ENST00000376643 FAT1Q14517 4588 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 LECT2O14960 151 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 UBE2D3P61077 147 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 UBE2D2P62837 147 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 WFDC2Q14508 124 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 ATRAIDQ6UW56 229 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 Q8N3U1 123 aa9.73□□□□□ -0.85
HDAC6-204ENST00000376643 TMSB15BA0A087X1C1 80 aa9.72□□□□□ -0.85
HDAC6-204ENST00000376643 TMEM262E9PQX1 116 aa9.72□□□□□ -0.85
HDAC6-204ENST00000376643 ZNF56Q15929 161 aa9.72□□□□□ -0.85
HDAC6-204ENST00000376643 ZNF471Q9BX82 626 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-204ENST00000376643 FLG2Q5D862 2391 aaPredicted RBP9.72□□□□□ -0.85
HDAC6-204ENST00000376643 TRBV6-8A0A0A6YYG3 113 aa9.71□□□□□ -0.86
HDAC6-204ENST00000376643 EIF5AP63241 154 aaKnown RBP9.71□□□□□ -0.86
HDAC6-204ENST00000376643 ZNF345Q14585 488 aa9.71□□□□□ -0.86
HDAC6-204ENST00000376643 HERC1Q15751 4861 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 PAGE4O60829 102 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 SMIM17P0DL12 118 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 SPANXN1Q5VSR9 72 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 Q9UF83 564 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 SRRM2Q9UQ35 2752 aaKnown RBP9.7□□□□□ -0.86
HDAC6-204ENST00000376643 VPS13BQ7Z7G8 4022 aa9.7□□□□□ -0.86
HDAC6-204ENST00000376643 OR5AL1P0C617 328 aa9.69□□□□□ -0.86
HDAC6-204ENST00000376643 BAGE2Q86Y30 109 aa9.69□□□□□ -0.86
HDAC6-204ENST00000376643 SFT2D1Q8WV19 159 aa9.69□□□□□ -0.86
HDAC6-204ENST00000376643 CHAC1Q9BUX1 264 aa9.69□□□□□ -0.86
HDAC6-204ENST00000376643 CYTL1Q9NRR1 136 aa9.69□□□□□ -0.86
HDAC6-204ENST00000376643 KRTAP29-1A8MX34 341 aaPredicted RBP9.68□□□□□ -0.86
HDAC6-204ENST00000376643 MIAQ16674 131 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 SCXQ7RTU7 201 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 FAM213BQ8TBF2 198 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 MBD3L1Q8WWY6 194 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 AP1S3Q96PC3 154 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 CHCHD5Q9BSY4 110 aa9.68□□□□□ -0.86
HDAC6-204ENST00000376643 A0A1B0GVG6 124 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 KANTRA0A1W2PQU2 76 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 F5H697 171 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 SNAI2O43623 268 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 ANGP03950 147 aaKnown RBP9.67□□□□□ -0.86
HDAC6-204ENST00000376643 PRR27Q6MZM9 219 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 KCNRGQ8N5I3 272 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 NEXN-AS1Q8NBZ9 246 aa9.67□□□□□ -0.86
HDAC6-204ENST00000376643 A0A0D9SG52 128 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 G3V3Q6 166 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 H7C1H1 209 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 IGLV2-8P01709 118 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 Q6ZNX1 250 aa9.66□□□□□ -0.86
HDAC6-204ENST00000376643 C15orf54Q8N8G6 183 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms