RNA–Protein interactions for RNA: ENST00000376259.6

TNFRSF1B-201, Transcript of TNF receptor superfamily member 1B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNFRSF1B, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF1B-201ENST00000376259 AJUBAQ96IF1 538 aa10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 DAZ1Q9NQZ3 744 aaKnown RBP10.96□□□□□ -0.65
TNFRSF1B-201ENST00000376259 PRM2P04554 102 aa10.96□□□□□ -0.66
TNFRSF1B-201ENST00000376259 GATD1Q8NB37 220 aa10.96□□□□□ -0.66
TNFRSF1B-201ENST00000376259 SYT8Q8NBV8 401 aa10.96□□□□□ -0.66
TNFRSF1B-201ENST00000376259 TMEM238C9JI98 176 aa10.95□□□□□ -0.66
TNFRSF1B-201ENST00000376259 DYNLRB2Q8TF09 96 aa10.95□□□□□ -0.66
TNFRSF1B-201ENST00000376259 TRBV6-1A0A0K0K1D8 114 aa10.94□□□□□ -0.66
TNFRSF1B-201ENST00000376259 NDUFS8O00217 210 aa10.94□□□□□ -0.66
TNFRSF1B-201ENST00000376259 PLEKHB2Q96CS7 222 aa10.94□□□□□ -0.66
TNFRSF1B-201ENST00000376259 IGHV3-53P01767 116 aa10.94□□□□□ -0.66
TNFRSF1B-201ENST00000376259 IGHV4-59P01825 116 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 CD28P10747 220 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 HHLA3Q9XRX5 114 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 TNFRSF18Q9Y5U5 241 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 CELSR1Q9NYQ6 3014 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 SIVA1O15304 175 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 INSL3P51460 131 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 LMO4P61968 165 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 MRAP2Q96G30 205 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 IGHV4-30-2A0A087WSY4 118 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 CLPSL1A2RUU4 121 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 GAGE12HA6NDE8 117 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 C11orf86A6NJI1 115 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 RASL10AQ92737 203 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 MDFICQ9P1T7 246 aa10.93□□□□□ -0.66
TNFRSF1B-201ENST00000376259 DOPEY1Q5JWR5 2465 aa10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 VCYO14598 125 aa10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 ZFP2Q6ZN57 461 aa10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 BAALCQ8WXS3 180 aa10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 GEMIN7Q9H840 131 aaKnown RBP10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 U3KQK5 164 aa10.92□□□□□ -0.66
TNFRSF1B-201ENST00000376259 LYRM7Q5U5X0 104 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 CEMP1Q6PRD7 247 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 UBE2E2Q96LR5 201 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 LINC01587Q99440 93 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 IGHV7-4-1A0A0J9YVY3 117 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 C9JAW5 83 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 NBL1P41271 181 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 DEFB131AP59861 70 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 C16orf54Q6UWD8 224 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 G3V4G9 280 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 RRN3P1Q2M238 152 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 FOXI2Q6ZQN5 318 aa10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 DLX4Q92988 240 aaPredicted RBP10.91□□□□□ -0.66
TNFRSF1B-201ENST00000376259 FAM223BA6NKX1 122 aa10.9□□□□□ -0.66
TNFRSF1B-201ENST00000376259 FAM223AQ8IWN6 122 aa10.9□□□□□ -0.66
TNFRSF1B-201ENST00000376259 SUMO4Q6EEV6 95 aa10.9□□□□□ -0.66
TNFRSF1B-201ENST00000376259 C20orf78Q9BR46 151 aa10.9□□□□□ -0.66
TNFRSF1B-201ENST00000376259 NRACQ8N912 160 aa10.9□□□□□ -0.66
TNFRSF1B-201ENST00000376259 NDUFA4O00483 81 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 LGALS1P09382 135 aaKnown RBP10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 P0DMU3 169 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 FAM231AP0DMU4 169 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 FAM231CP0DMU5 169 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 C9orf47Q6ZRZ4 202 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 A0A0J9YXV3 536 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 PPP1R17O96001 155 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 PMVKQ15126 192 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 FLNCQ14315 2725 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 CRYBG3Q68DQ2 2970 aa10.89□□□□□ -0.67
TNFRSF1B-201ENST00000376259 ZFAND2AQ8N6M9 145 aa10.88□□□□□ -0.67
TNFRSF1B-201ENST00000376259 Q8N6K4 173 aa10.88□□□□□ -0.67
TNFRSF1B-201ENST00000376259 A0A1B0GV72 72 aa10.88□□□□□ -0.67
TNFRSF1B-201ENST00000376259 MSMBP08118 114 aa10.88□□□□□ -0.67
TNFRSF1B-201ENST00000376259 RBAKDNA6NC62 111 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 A8MWV9 139 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 SPAG8Q99932 426 aaPredicted RBP10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 UTP20O75691 2785 aaKnown RBP10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 SPINK8P0C7L1 97 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 BSNQ9UPA5 3926 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 C11orf71Q6IPW1 123 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 Q8N1Y9 231 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 USMG5Q96IX5 58 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 TOMM7Q9P0U1 55 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 ERG28Q9UKR5 140 aa10.87□□□□□ -0.67
TNFRSF1B-201ENST00000376259 J3QQQ9 107 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 DEFB112Q30KQ8 113 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 DAND5Q8N907 189 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 ZNF48Q96MX3 618 aaPredicted RBP10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 MEIG1Q5JSS6 88 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 XCL2Q9UBD3 114 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 RNF223E7ERA6 249 aa10.86□□□□□ -0.67
TNFRSF1B-201ENST00000376259 F8W1H4 67 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 CKS1BP61024 79 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 ITPR1Q14643 2758 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 FBXL19-AS1Q494R0 122 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 UFSP1Q6NVU6 142 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 TMEM190Q8WZ59 177 aa10.85□□□□□ -0.67
TNFRSF1B-201ENST00000376259 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1B-201ENST00000376259 TRAV13-1A0A0B4J241 112 aa10.84□□□□□ -0.67
TNFRSF1B-201ENST00000376259 IGKV2-29A2NJV5 120 aaPredicted RBP10.84□□□□□ -0.67
TNFRSF1B-201ENST00000376259 PROK1P58294 105 aa10.84□□□□□ -0.67
TNFRSF1B-201ENST00000376259 CFHR3Q02985 330 aa10.84□□□□□ -0.67
TNFRSF1B-201ENST00000376259 TRAV8-3A0A0A6YYJ7 113 aa10.83□□□□□ -0.67
TNFRSF1B-201ENST00000376259 A4D1N5 150 aa10.83□□□□□ -0.67
TNFRSF1B-201ENST00000376259 EBI3Q14213 229 aa10.83□□□□□ -0.67
TNFRSF1B-201ENST00000376259 TCTEX1D4Q5JR98 221 aa10.83□□□□□ -0.67
TNFRSF1B-201ENST00000376259 HIGD1BQ9P298 99 aa10.83□□□□□ -0.67
TNFRSF1B-201ENST00000376259 COL27A1Q8IZC6 1860 aaPredicted RBP10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms