RNA–Protein interactions for RNA: ENST00000374943.8

HLA-DQB1-201, Transcript of major histocompatibility complex, class II, DQ beta 1, humanhuman

BASIC

Gene HLA-DQB1, Length 1,656 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQB1-201ENST00000374943 FXYD7P58549 80 aa13.23□□□□□ -0.29
HLA-DQB1-201ENST00000374943 C14orf144Q96I85 54 aa13.23□□□□□ -0.29
HLA-DQB1-201ENST00000374943 SMIM2Q9BVW6 85 aa13.23□□□□□ -0.29
HLA-DQB1-201ENST00000374943 MGPP08493 103 aa13.22□□□□□ -0.29
HLA-DQB1-201ENST00000374943 CMC4P56277 68 aaPredicted RBP13.22□□□□□ -0.29
HLA-DQB1-201ENST00000374943 MIEN1Q9BRT3 115 aa13.22□□□□□ -0.29
HLA-DQB1-201ENST00000374943 IGLV1-51P01701 117 aa13.21□□□□□ -0.29
HLA-DQB1-201ENST00000374943 KRTAP10-3P60369 221 aa13.21□□□□□ -0.29
HLA-DQB1-201ENST00000374943 NSUN5P1Q3KNT7 163 aa13.21□□□□□ -0.29
HLA-DQB1-201ENST00000374943 ATOH7Q8N100 152 aa13.21□□□□□ -0.29
HLA-DQB1-201ENST00000374943 CBY3A6NI87 242 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 OR11H12B2RN74 326 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 K7EMI3 77 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 SAP30O75446 220 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 SUMO2P61956 95 aaKnown RBP13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 CTAG1AP78358 180 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 ZNF705AQ6ZN79 300 aaPredicted RBP13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 FAM110AQ9BQ89 295 aa13.21□□□□□ -0.3
HLA-DQB1-201ENST00000374943 LAGE3Q14657 143 aa13.2□□□□□ -0.3
HLA-DQB1-201ENST00000374943 INSP01308 110 aa13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 RPL32P62910 135 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 TRPT1Q86TN4 253 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 IFI27L1Q96BM0 104 aa13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 RPL39LQ96EH5 51 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 JPT2Q9H910 190 aa13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 FN1P02751 2386 aaKnown RBP13.19□□□□□ -0.3
HLA-DQB1-201ENST00000374943 CRLF1O75462 422 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 LGALS9BQ3B8N2 356 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 LGALS9CQ6DKI2 356 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 STHQ8IWL8 128 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 TMEM158Q8WZ71 300 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 IGLC3P0DOY3 106 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 MAJINQ3KP22 176 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 PIK3CD-AS1Q5SR53 167 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 SUMO4Q6EEV6 95 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 PTH2Q96A98 100 aa13.18□□□□□ -0.3
HLA-DQB1-201ENST00000374943 DNHD1Q96M86 4753 aa13.17□□□□□ -0.3
HLA-DQB1-201ENST00000374943 NIPBLQ6KC79 2804 aaeCLIP13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 A0A087WWL8 130 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 CRYGDP07320 174 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 IGLL1P15814 213 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 ZNF415Q09FC8 603 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 BEAN1Q3B7T3 259 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 ZNF876PQ49A33 203 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 ORMDL2Q53FV1 153 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 ST20Q9HBF5 79 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 UQCR10Q9UDW1 63 aa13.16□□□□□ -0.3
HLA-DQB1-201ENST00000374943 H0Y8G0 127 aa13.15□□□□□ -0.3
HLA-DQB1-201ENST00000374943 TCAPO15273 167 aa13.15□□□□□ -0.3
HLA-DQB1-201ENST00000374943 NACAE9PAV3 2078 aa13.15□□□□□ -0.3
HLA-DQB1-201ENST00000374943 TRBV6-5A0A0K0K1A5 114 aa13.15□□□□□ -0.31
HLA-DQB1-201ENST00000374943 MRPL52Q86TS9 123 aaKnown RBP13.15□□□□□ -0.31
HLA-DQB1-201ENST00000374943 LINC00482Q8N8I6 264 aa13.15□□□□□ -0.31
HLA-DQB1-201ENST00000374943 ATP5LO75964 103 aa13.14□□□□□ -0.31
HLA-DQB1-201ENST00000374943 MCRIP2Q9BUT9 160 aaKnown RBP13.14□□□□□ -0.31
HLA-DQB1-201ENST00000374943 HSBP1L1C9JCN9 74 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 M0R2P5 195 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 NUTF2P61970 127 aaKnown RBP13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 C11orf72Q8NBR9 251 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 LINC01587Q99440 93 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 EDA2RQ9HAV5 297 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 C19orf73Q9NVV2 129 aa13.13□□□□□ -0.31
HLA-DQB1-201ENST00000374943 F5H697 171 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 PF4P02776 101 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 POLR2KP53803 58 aaKnown RBP13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 GOLT1BQ9Y3E0 138 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 hDV102S1A0JD36 115 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 NUDT3O95989 172 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 ZNF56Q15929 161 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 LBHQ53QV2 105 aaPredicted RBP13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 FAM74A4Q5TZK3 123 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 C18orf15Q96N68 181 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 PMCHL2Q9BQD1 86 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 SPXQ9BT56 116 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 CSTL1Q9H114 145 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 XCL2Q9UBD3 114 aa13.12□□□□□ -0.31
HLA-DQB1-201ENST00000374943 M0QY20 66 aa13.11□□□□□ -0.31
HLA-DQB1-201ENST00000374943 HTN1P15515 57 aa13.11□□□□□ -0.31
HLA-DQB1-201ENST00000374943 A8MWV9 139 aa13.1□□□□□ -0.31
HLA-DQB1-201ENST00000374943 C1orf158Q8N1D5 194 aa13.1□□□□□ -0.31
HLA-DQB1-201ENST00000374943 TOMM6Q96B49 74 aa13.1□□□□□ -0.31
HLA-DQB1-201ENST00000374943 VCYO14598 125 aa13.09□□□□□ -0.31
HLA-DQB1-201ENST00000374943 MORN3Q6PF18 240 aaPredicted RBP13.09□□□□□ -0.31
HLA-DQB1-201ENST00000374943 TRBV27A0A0K0K1C4 114 aa13.08□□□□□ -0.31
HLA-DQB1-201ENST00000374943 ODF1Q14990 250 aa13.08□□□□□ -0.31
HLA-DQB1-201ENST00000374943 UFSP1Q6NVU6 142 aa13.08□□□□□ -0.31
HLA-DQB1-201ENST00000374943 ZMAT4Q9H898 229 aa13.08□□□□□ -0.31
HLA-DQB1-201ENST00000374943 LINC01549A6NIU2 74 aa13.08□□□□□ -0.32
HLA-DQB1-201ENST00000374943 PRM2P04554 102 aa13.08□□□□□ -0.32
HLA-DQB1-201ENST00000374943 G0S2P27469 103 aa13.08□□□□□ -0.32
HLA-DQB1-201ENST00000374943 IL17DQ8TAD2 202 aa13.08□□□□□ -0.32
HLA-DQB1-201ENST00000374943 SDHAF1A6NFY7 115 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 H7C1H1 209 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 M0R143 59 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 Q6ZN92 141 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 TMEM208Q9BTX3 173 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 SNHG12Q9BXW3 62 aa13.07□□□□□ -0.32
HLA-DQB1-201ENST00000374943 JMJD1CQ15652 2540 aa13.06□□□□□ -0.32
HLA-DQB1-201ENST00000374943 EREGO14944 169 aa13.06□□□□□ -0.32
HLA-DQB1-201ENST00000374943 PRSS1P07477 247 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms