RNA–Protein interactions for RNA: ENST00000374680.3

RXRB-201, Transcript of retinoid X receptor beta, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene RXRB, Length 2,908 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RXRB-201ENST00000374680 SLURP1P55000 103 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 PRSS29PA6NIE9 313 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 ZNF56Q15929 161 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 SUMO4Q6EEV6 95 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 Q8N1Y9 231 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 FAM19A4Q96LR4 140 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 SAP30O75446 220 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 HOXD3P31249 432 aaPredicted RBP12.72□□□□□ -0.37
RXRB-201ENST00000374680 KLHL30-AS1Q8NEE0 82 aa12.72□□□□□ -0.37
RXRB-201ENST00000374680 OPRPNQ99935 248 aaPredicted RBP12.72□□□□□ -0.37
RXRB-201ENST00000374680 H3BRM9 83 aa12.71□□□□□ -0.37
RXRB-201ENST00000374680 ORMDL2Q53FV1 153 aa12.71□□□□□ -0.37
RXRB-201ENST00000374680 SFTA2Q6UW10 78 aa12.71□□□□□ -0.37
RXRB-201ENST00000374680 HIST1H4GQ99525 98 aa12.71□□□□□ -0.37
RXRB-201ENST00000374680 H7C1H1 209 aa12.71□□□□□ -0.38
RXRB-201ENST00000374680 CYSLTR1Q9Y271 337 aa12.71□□□□□ -0.38
RXRB-201ENST00000374680 TP53TG1Q9Y2A0 90 aa12.71□□□□□ -0.38
RXRB-201ENST00000374680 KLLNB2CW77 178 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 SMIM13P0DJ93 91 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 SNRPD3P62318 126 aaKnown RBP12.7□□□□□ -0.38
RXRB-201ENST00000374680 BAALCQ8WXS3 180 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 F8VRH5 84 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 SCGB2A2Q13296 93 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 HIST2H2BCQ6DN03 193 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 VPS25Q9BRG1 176 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 SPCS1Q9Y6A9 102 aa12.7□□□□□ -0.38
RXRB-201ENST00000374680 LINC00315P59091 139 aa12.69□□□□□ -0.38
RXRB-201ENST00000374680 MTURNQ8N3F0 131 aa12.69□□□□□ -0.38
RXRB-201ENST00000374680 TOMM6Q96B49 74 aa12.69□□□□□ -0.38
RXRB-201ENST00000374680 SDHAF1A6NFY7 115 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 SIVA1O15304 175 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 TCTEX1D4Q5JR98 221 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 OR11H12B2RN74 326 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 SLC25A16P16260 332 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 SAMD5Q5TGI4 173 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 OR11H1Q8NG94 326 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 OR11H2Q8NH07 326 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 A0A0J9YX75 114 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 K7EMT4 169 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 OCIAD2Q56VL3 154 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 C20orf78Q9BR46 151 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 KIF25-AS1Q9Y6Z4 181 aa12.68□□□□□ -0.38
RXRB-201ENST00000374680 NEXN-AS1Q8NBZ9 246 aa12.67□□□□□ -0.38
RXRB-201ENST00000374680 UBR5O95071 2799 aaPredicted RBP12.67□□□□□ -0.38
RXRB-201ENST00000374680 DEFB131AP59861 70 aa12.67□□□□□ -0.38
RXRB-201ENST00000374680 ZNF876PQ49A33 203 aa12.67□□□□□ -0.38
RXRB-201ENST00000374680 VPREB3Q9UKI3 123 aa12.67□□□□□ -0.38
RXRB-201ENST00000374680 PRSS47A8MTI9 375 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 P0DMU3 169 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 FAM231AP0DMU4 169 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 FAM231CP0DMU5 169 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 HLA-DRB4P13762 266 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 PROK1P58294 105 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 COTL1Q14019 142 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 HLA-DRB4X5D2U9 266 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 IGHV3-64A0A075B6Q5 118 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 PLNP26678 52 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 PRADC1Q9BSG0 188 aa12.66□□□□□ -0.38
RXRB-201ENST00000374680 A0A1W2PPM0 123 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 K7EQG2 157 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 SCGB1D4Q6XE38 83 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 ZFP2Q6ZN57 461 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 GTF2H5Q6ZYL4 71 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 CEND1Q8N111 149 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 GATA3P23771 443 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 ZNF702PQ9H963 129 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 ITPR2Q14571 2701 aa12.65□□□□□ -0.38
RXRB-201ENST00000374680 A0A096LNT2 108 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 IGHV3-16A0A0C4DH30 117 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 A0A1W2PRX2 142 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 TSHBP01222 138 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 IGHV4-31P0DP07 118 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 Q5PR19 223 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 TMEM170BQ5T4T1 132 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 AMTNQ6UX39 209 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 Q96MF0 132 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 KIR2DL4Q99706 377 aa12.65□□□□□ -0.39
RXRB-201ENST00000374680 FABP2P12104 132 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 APRG1Q8IVJ8 170 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 Q9UF83 564 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 C11orf86A6NJI1 115 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 DSCR9P59020 149 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 PLEKHB2Q96CS7 222 aa12.64□□□□□ -0.39
RXRB-201ENST00000374680 IGHV1OR15-1A0A075B7D0 117 aa12.63□□□□□ -0.39
RXRB-201ENST00000374680 ZNF815PA8K554 130 aa12.63□□□□□ -0.39
RXRB-201ENST00000374680 CRYGDP07320 174 aa12.63□□□□□ -0.39
RXRB-201ENST00000374680 LGALS1P09382 135 aaKnown RBP12.63□□□□□ -0.39
RXRB-201ENST00000374680 BRI3O95415 125 aa12.63□□□□□ -0.39
RXRB-201ENST00000374680 K7EP34 96 aa12.62□□□□□ -0.39
RXRB-201ENST00000374680 RBMY1A1P0DJD3 496 aaKnown RBP12.62□□□□□ -0.39
RXRB-201ENST00000374680 RBMY1CP0DJD4 496 aa12.62□□□□□ -0.39
RXRB-201ENST00000374680 RBMY1FQ15415 496 aaKnown RBP12.62□□□□□ -0.39
RXRB-201ENST00000374680 RPL24P83731 157 aaKnown RBP12.62□□□□□ -0.39
RXRB-201ENST00000374680 MYMXA0A1B0GTQ4 84 aa12.61□□□□□ -0.39
RXRB-201ENST00000374680 RNASE13Q5GAN3 156 aaKnown RBP12.61□□□□□ -0.39
RXRB-201ENST00000374680 VCYO14598 125 aa12.61□□□□□ -0.39
RXRB-201ENST00000374680 POLR2KP53803 58 aaKnown RBP12.61□□□□□ -0.39
RXRB-201ENST00000374680 RIPPLY3P57055 190 aa12.61□□□□□ -0.39
RXRB-201ENST00000374680 SRSF9Q13242 221 aaKnown RBP eCLIP12.61□□□□□ -0.391e-7■□□□□ 10.6
RXRB-201ENST00000374680 UFSP1Q6NVU6 142 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 85 ms