RNA–Protein interactions for RNA: ENST00000373474.8

LMX1B-202, Transcript of LIM homeobox transcription factor 1 beta, humanhuman

TSL 1 (best) BASIC

Gene LMX1B, Length 5,797 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMX1B-202ENST00000373474 CGB3P0DN86 165 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 DAZ2Q13117 558 aaKnown RBP10.97□□□□□ -0.65
LMX1B-202ENST00000373474 DAZ4Q86SG3 579 aaKnown RBP10.97□□□□□ -0.65
LMX1B-202ENST00000373474 DAZ3Q9NR90 486 aaKnown RBP10.97□□□□□ -0.65
LMX1B-202ENST00000373474 DOCK8Q8NF50 2099 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 ZDBF2Q9HCK1 2354 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 A0A0J9YXV3 536 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 CTRLP40313 264 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 E7EUB6 86 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 LECT2O14960 151 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 ATP5EP2Q5VTU8 51 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 SEM1Q6ZVN7 128 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 CLPSL2Q6UWE3 100 aa10.97□□□□□ -0.65
LMX1B-202ENST00000373474 C5orf56Q8N8D9 126 aa10.96□□□□□ -0.65
LMX1B-202ENST00000373474 MRPL36Q9P0J6 103 aaKnown RBP10.96□□□□□ -0.65
LMX1B-202ENST00000373474 COL4A4P53420 1690 aaPredicted RBP10.96□□□□□ -0.66
LMX1B-202ENST00000373474 C19orf71A6NCJ1 209 aa10.96□□□□□ -0.66
LMX1B-202ENST00000373474 AJUBAQ96IF1 538 aa10.96□□□□□ -0.66
LMX1B-202ENST00000373474 NOP10Q9NPE3 64 aaKnown RBP10.96□□□□□ -0.66
LMX1B-202ENST00000373474 FRMD6-AS1P0C7T7 363 aa10.96□□□□□ -0.66
LMX1B-202ENST00000373474 CLEC2BQ92478 149 aa10.96□□□□□ -0.66
LMX1B-202ENST00000373474 PRAC2D3DTV9 90 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 COX7A2LO14548 114 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 IGHV4-4A0A075B6R2 117 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 IGLV1-47P01700 117 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 CRIP3Q6Q6R5 217 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 UPK3BQ9BT76 320 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 MED14OSP0DP75 135 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 C5orf38Q86SI9 138 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 CGB7P0DN87 165 aa10.95□□□□□ -0.66
LMX1B-202ENST00000373474 DENND4AQ7Z401 1863 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 IGHV4-38-2P0DP08 117 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 Q8N1Y9 231 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 ZNF503Q96F45 646 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 RTTNQ86VV8 2226 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 A0A1W2PNU3 283 aaPredicted RBP10.94□□□□□ -0.66
LMX1B-202ENST00000373474 Q6ZPA2 131 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 NDUFA11Q86Y39 141 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 ZNF407Q9C0G0 2248 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 CAMK2N2Q96S95 79 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 K7EQD1 137 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 IGKV2D-24A0A075B6R9 120 aa10.94□□□□□ -0.66
LMX1B-202ENST00000373474 Q8N7P7 452 aa10.93□□□□□ -0.66
LMX1B-202ENST00000373474 DIRC1Q969H9 104 aa10.93□□□□□ -0.66
LMX1B-202ENST00000373474 IGHV4-61A0A0C4DH41 118 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 ODF1Q14990 250 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 IGKV1D-37A0A075B6S9 117 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 RPL18AQ02543 176 aaKnown RBP10.92□□□□□ -0.66
LMX1B-202ENST00000373474 MT-ATP8P03928 68 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 MSMPQ1L6U9 139 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 MPLKIPQ8TAP9 179 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 A0A096LPF7 62 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 TCL1BO95988 128 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 SLURP1P55000 103 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 SPATA12Q7Z6I5 190 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 ZNF295-AS1Q8N0V1 137 aa10.92□□□□□ -0.66
LMX1B-202ENST00000373474 ZNF318Q5VUA4 2279 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 TIRAPP58753 221 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 TRAV23DV6A0A075B6W5 121 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 DEFB136Q30KP8 78 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 APRG1Q8IVJ8 170 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 C20orf197Q8N268 126 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 A0A1B0GXF2 115 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 CCL24O00175 119 aa10.91□□□□□ -0.66
LMX1B-202ENST00000373474 ALPK3Q96L96 1907 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 IGHV1-58A0A0C4DH39 117 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 NDUFC1O43677 76 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 IGLV2-8P01709 118 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 PTH2Q96A98 100 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 BRWD1-AS2P59051 145 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 EIF4EBP1Q13541 118 aaPredicted RBP10.9□□□□□ -0.66
LMX1B-202ENST00000373474 C16orf74Q96GX8 76 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 IGLC6P0CF74 106 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 ADORA2A-AS1P86434 159 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 LINC00574Q9H8X3 128 aa10.9□□□□□ -0.66
LMX1B-202ENST00000373474 A0A0U1RQV1 116 aa10.9□□□□□ -0.67
LMX1B-202ENST00000373474 K7EMT4 169 aa10.9□□□□□ -0.67
LMX1B-202ENST00000373474 TNRC6AQ8NDV7 1962 aaKnown RBP10.89□□□□□ -0.67
LMX1B-202ENST00000373474 Q6ZQT7 251 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 EML6Q6ZMW3 1958 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 IGHV4-30-2A0A087WSY4 118 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 K7ERS5 55 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 BLCAPP62952 87 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 FAM110AQ9BQ89 295 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 NDUFA1O15239 70 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 ZFP36P26651 326 aaKnown RBP10.89□□□□□ -0.67
LMX1B-202ENST00000373474 NUP210LQ5VU65 1888 aa10.89□□□□□ -0.67
LMX1B-202ENST00000373474 NCR3O14931 201 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 MIAQ16674 131 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 TTTY13Q9BZ97 58 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
LMX1B-202ENST00000373474 C2orf70A6NJV1 201 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 BPY2O14599 106 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 C10orf105Q8TEF2 133 aa10.88□□□□□ -0.67
LMX1B-202ENST00000373474 SIRPDQ9H106 197 aa10.87□□□□□ -0.67
LMX1B-202ENST00000373474 DAND5Q8N907 189 aa10.87□□□□□ -0.67
LMX1B-202ENST00000373474 C20orf173Q96LM9 149 aa10.87□□□□□ -0.67
LMX1B-202ENST00000373474 PRR15LQ9BU68 103 aa10.87□□□□□ -0.67
LMX1B-202ENST00000373474 PLA2G5P39877 138 aa10.86□□□□□ -0.67
LMX1B-202ENST00000373474 IGHV4OR15-8A0A075B7B6 117 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 37 ms