RNA–Protein interactions for RNA: ENST00000373166.7

TRAPPC3-204, Transcript of trafficking protein particle complex 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAPPC3, Length 1,265 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC3-204ENST00000373166 RPL35P42766 123 aaKnown RBP13.01□□□□□ -0.33
TRAPPC3-204ENST00000373166 PHLDA3Q9Y5J5 127 aa13.01□□□□□ -0.33
TRAPPC3-204ENST00000373166 DNAH10OSP0CZ25 163 aa13□□□□□ -0.33
TRAPPC3-204ENST00000373166 MEF2BQ02080 365 aaPredicted RBP13□□□□□ -0.33
TRAPPC3-204ENST00000373166 ZFP2Q6ZN57 461 aa13□□□□□ -0.33
TRAPPC3-204ENST00000373166 MLST8Q9BVC4 326 aa13□□□□□ -0.33
TRAPPC3-204ENST00000373166 RHODO00212 210 aa12.99□□□□□ -0.33
TRAPPC3-204ENST00000373166 PRR27Q6MZM9 219 aa12.99□□□□□ -0.33
TRAPPC3-204ENST00000373166 ZFP82Q8N141 532 aa12.99□□□□□ -0.33
TRAPPC3-204ENST00000373166 DERL1Q9BUN8 251 aa12.99□□□□□ -0.33
TRAPPC3-204ENST00000373166 M0R381 172 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 PDE6DO43924 150 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 BCL2P10415 239 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 GCSHP23434 173 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 DMRTA1Q5VZB9 504 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 LY96Q9Y6Y9 160 aa12.98□□□□□ -0.33
TRAPPC3-204ENST00000373166 CXCL1P09341 107 aa12.97□□□□□ -0.33
TRAPPC3-204ENST00000373166 TIRAPP58753 221 aa12.97□□□□□ -0.33
TRAPPC3-204ENST00000373166 CENPWQ5EE01 88 aa12.97□□□□□ -0.33
TRAPPC3-204ENST00000373166 WFDC10BQ8IUB3 73 aa12.97□□□□□ -0.33
TRAPPC3-204ENST00000373166 FLG2Q5D862 2391 aaPredicted RBP12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 J3QL48 77 aa12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 TAGLN2P37802 199 aaKnown RBP12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 RPL19P84098 196 aaKnown RBP12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 FAM74A4Q5TZK3 123 aa12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 Q6ZSN1 163 aa12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 JPT2Q9H910 190 aa12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 VAX2Q9UIW0 290 aa12.96□□□□□ -0.33
TRAPPC3-204ENST00000373166 K7EP13 123 aa12.95□□□□□ -0.34
TRAPPC3-204ENST00000373166 GNG4P50150 75 aa12.95□□□□□ -0.34
TRAPPC3-204ENST00000373166 ALKAL2Q6UX46 152 aa12.95□□□□□ -0.34
TRAPPC3-204ENST00000373166 SFRP2Q96HF1 295 aa12.95□□□□□ -0.34
TRAPPC3-204ENST00000373166 SAMD10Q9BYL1 202 aa12.95□□□□□ -0.34
TRAPPC3-204ENST00000373166 EVI2AP22794 236 aa12.94□□□□□ -0.34
TRAPPC3-204ENST00000373166 UFSP1Q6NVU6 142 aa12.94□□□□□ -0.34
TRAPPC3-204ENST00000373166 SMIM12Q96EX1 92 aa12.94□□□□□ -0.34
TRAPPC3-204ENST00000373166 MED9Q9NWA0 146 aa12.94□□□□□ -0.34
TRAPPC3-204ENST00000373166 MSRB1Q9NZV6 116 aa12.94□□□□□ -0.34
TRAPPC3-204ENST00000373166 A0A087WWL8 130 aa12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 TRAV8-6A0A0B4J262 113 aa12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 A0A1B0GVG6 124 aa12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 BLOC1S1P78537 153 aa12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 ATP6V0E2Q8NHE4 81 aa12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 DAZAP1Q96EP5 407 aaKnown RBP12.93□□□□□ -0.34
TRAPPC3-204ENST00000373166 GAGE12JA6NER3 117 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 GAGE1Q13065 139 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 GAGE4Q13068 117 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 GAGE5Q13069 117 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 GAGE13Q4V321 117 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 OR10J3Q5JRS4 329 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 BOLA1Q9Y3E2 137 aa12.92□□□□□ -0.34
TRAPPC3-204ENST00000373166 RAB19A4D1S5 217 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 NKX2-5P52952 324 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 HAMPP81172 84 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 C10orf126Q8N4M7 172 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 C14orf178Q8N769 122 aaPredicted RBP12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 OR10AG1Q8NH19 301 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 TMEM70Q9BUB7 260 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 GTSF1LQ9H1H1 148 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 BIN3Q9NQY0 253 aa12.91□□□□□ -0.34
TRAPPC3-204ENST00000373166 IGHV3-38A0A0C4DH36 116 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 SNAI2O43623 268 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 IGLV2-8P01709 118 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 OR5AL1P0C617 328 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 LINC00694P0DN24 101 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 LELP1Q5T871 98 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 SPANXN1Q5VSR9 72 aa12.9□□□□□ -0.34
TRAPPC3-204ENST00000373166 IGLV5-52A0A0A0MRZ9 124 aa12.89□□□□□ -0.35
TRAPPC3-204ENST00000373166 CRYGDP07320 174 aa12.89□□□□□ -0.35
TRAPPC3-204ENST00000373166 RPS20P60866 119 aaKnown RBP12.89□□□□□ -0.35
TRAPPC3-204ENST00000373166 TRBV20OR9-2A0A075B6H5 130 aa12.88□□□□□ -0.35
TRAPPC3-204ENST00000373166 LINC01556Q5JQF7 62 aa12.88□□□□□ -0.35
TRAPPC3-204ENST00000373166 OR2D3Q8NGH3 330 aa12.88□□□□□ -0.35
TRAPPC3-204ENST00000373166 SSBP4Q9BWG4 385 aaPredicted RBP12.88□□□□□ -0.35
TRAPPC3-204ENST00000373166 C19orf71A6NCJ1 209 aa12.87□□□□□ -0.35
TRAPPC3-204ENST00000373166 P01737 135 aa12.87□□□□□ -0.35
TRAPPC3-204ENST00000373166 ZNF56Q15929 161 aa12.87□□□□□ -0.35
TRAPPC3-204ENST00000373166 NTN5Q8WTR8 489 aaPredicted RBP12.87□□□□□ -0.35
TRAPPC3-204ENST00000373166 TPPP3Q9BW30 176 aa12.87□□□□□ -0.35
TRAPPC3-204ENST00000373166 MUC21A0A0G2JKD1 596 aa12.86□□□□□ -0.35
TRAPPC3-204ENST00000373166 TRBV10-1A0A0K0K1A3 114 aa12.86□□□□□ -0.35
TRAPPC3-204ENST00000373166 MUC21A0A140T8X8 626 aa12.86□□□□□ -0.35
TRAPPC3-204ENST00000373166 XKRY2A2RUG3 117 aa12.86□□□□□ -0.35
TRAPPC3-204ENST00000373166 A0A087WWC5 75 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 RBFOX3A6NFN3 312 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 PSCAO43653 123 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 RAB4BP61018 213 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 FER1L6-AS1Q8NA97 138 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 LYPD6BQ8NI32 183 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 AP1S3Q96PC3 154 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 Q9UF83 564 aa12.85□□□□□ -0.35
TRAPPC3-204ENST00000373166 TMEM250H0YL14 139 aa12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 SMIM17P0DL12 118 aa12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 GZMBP10144 247 aa12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 SSTP61278 116 aa12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 RPL36AP83881 106 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 RPL36ALQ969Q0 106 aaKnown RBP12.84□□□□□ -0.35
TRAPPC3-204ENST00000373166 IGHV3-30P01768 117 aa12.83□□□□□ -0.36
TRAPPC3-204ENST00000373166 IGHV3-33P01772 117 aa12.83□□□□□ -0.36
TRAPPC3-204ENST00000373166 IGLC6P0CF74 106 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 62.8 ms