RNA–Protein interactions for RNA: ENST00000373088.5

PCDH11X-204, Transcript of protocadherin 11 X-linked, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PCDH11X, Length 4,069 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH11X-204ENST00000373088 SUMO2P61956 95 aaKnown RBP3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 TMEM160Q9NX00 188 aa3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 ZMAT5Q9UDW3 170 aaKnown RBP3.38□□□□□ -1.87
PCDH11X-204ENST00000373088 hDV102S1A0JD36 115 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 SYS1-DBNDD2H3BUS1 97 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 DEFB130BP0DP73 79 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 DEFB130AP0DP74 79 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 NMUP48645 174 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 HNRNPA3P51991 378 aaKnown RBP3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 LAGE3Q14657 143 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 C12orf54Q6X4T0 127 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 COX8CQ7Z4L0 72 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 OR4C5Q8NGB2 326 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 TRBV7-9A0A0J9YWB2 115 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 MAJINQ3KP22 176 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 DGAT2L7PQ6IED9 249 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 PHLDA1Q8WV24 401 aaPredicted RBP3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 RNF185Q96GF1 192 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE12BA1L429 117 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 SDHAF1A6NFY7 115 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE7O76087 117 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 PPP1R17O96001 155 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE12FP0CL80 117 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE12GP0CL81 117 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE12IP0CL82 117 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 LINC00482Q8N8I6 264 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 MRAP2Q96G30 205 aa3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 NOP10Q9NPE3 64 aaKnown RBP3.37□□□□□ -1.87
PCDH11X-204ENST00000373088 IGHV3-38A0A0C4DH36 116 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 H7C1H1 209 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 HTN3P15516 51 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 SUMO4Q6EEV6 95 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 Q8N8P6 123 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 GATD1Q8NB37 220 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 SMIM2Q9BVW6 85 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 PDZD2O15018 2839 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1BA6NDE4 496 aaKnown RBP3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1EA6NEQ0 496 aaKnown RBP3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1DP0C7P1 496 aaKnown RBP3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 IGLL1P15814 213 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 AZU1P20160 251 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 C1QTNF4Q9BXJ3 329 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 LAMTOR2Q9Y2Q5 125 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 TRGV4A0A0C4DH28 118 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 M0R2P5 195 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 VCYO14598 125 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 DEFB4AO15263 64 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 ATP5LO75964 103 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 P0DMU3 169 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 FAM231AP0DMU4 169 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 FAM231CP0DMU5 169 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 ESDP10768 282 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 ORMDL2Q53FV1 153 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 C9orf66Q5T8R8 295 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 PET117Q6UWS5 81 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 URB1-AS1Q96HZ7 61 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 ODF3Q96PU9 254 aa3.36□□□□□ -1.87
PCDH11X-204ENST00000373088 TRAV9-2A0A087WT02 112 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 CTAG1AP78358 180 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 FHL3Q13643 280 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 AMTNQ6UX39 209 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 STPG4Q8N801 248 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 ZNF747Q9BV97 191 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 COL6A5A8TX70 2615 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 IGLV1-51P01701 117 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 KRTAP10-3P60369 221 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 C2orf66Q6UXQ4 117 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 RASL10AQ92737 203 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 CYSLTR1Q9Y271 337 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 CUBNO60494 3623 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 NSD1Q96L73 2696 aaPredicted RBP3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 TRAV2A0A0B4J234 112 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 IGKV3OR2-268A0A0C4DH90 116 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1A1P0DJD3 496 aaKnown RBP3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1CP0DJD4 496 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 RBMY1FQ15415 496 aaKnown RBP3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 CNFNQ9BYD5 112 aa3.35□□□□□ -1.87
PCDH11X-204ENST00000373088 TRAV8-6A0A0B4J262 113 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE12JA6NER3 117 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 A8MWV9 139 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 CRXO43186 299 aaPredicted RBP3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 HINT1P49773 126 aaPredicted RBP3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE1Q13065 139 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE4Q13068 117 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE5Q13069 117 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 GAGE13Q4V321 117 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 TRPT1Q86TN4 253 aaKnown RBP3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 ZNRF2Q8NHG8 242 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 DKK2Q9UBU2 259 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 UQCR10Q9UDW1 63 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 TP53TG1Q9Y2A0 90 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 OTOGQ6ZRI0 2925 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 MED14OSP0DP75 135 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 DEFB135Q30KP9 77 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 OXLD1Q5BKU9 147 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 Q6ZTI0 123 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 FAM19A4Q96LR4 140 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 STAB1Q9NY15 2570 aa3.34□□□□□ -1.87
PCDH11X-204ENST00000373088 RPL39P62891 51 aaKnown RBP3.34□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 149.8 ms