RNA–Protein interactions for RNA: ENST00000372066.7

LDB3-204, Transcript of LIM domain binding 3, humanhuman

TSL 1 (best) BASIC

Gene LDB3, Length 1,598 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-204ENST00000372066 CITED2Q99967 270 aaPredicted RBP10.46□□□□□ -0.74
LDB3-204ENST00000372066 C20orf78Q9BR46 151 aa10.46□□□□□ -0.74
LDB3-204ENST00000372066 NOTCH3Q9UM47 2321 aa10.46□□□□□ -0.74
LDB3-204ENST00000372066 DLEU1O43261 78 aa10.45□□□□□ -0.74
LDB3-204ENST00000372066 TCTEX1D4Q5JR98 221 aa10.45□□□□□ -0.74
LDB3-204ENST00000372066 POM121L12Q8N7R1 296 aa10.45□□□□□ -0.74
LDB3-204ENST00000372066 OR1N2Q8NGR9 330 aa10.45□□□□□ -0.74
LDB3-204ENST00000372066 GOLT1BQ9Y3E0 138 aa10.45□□□□□ -0.74
LDB3-204ENST00000372066 ATP5LO75964 103 aa10.44□□□□□ -0.74
LDB3-204ENST00000372066 CDKN1BP46527 198 aa10.44□□□□□ -0.74
LDB3-204ENST00000372066 LAGE3Q14657 143 aa10.44□□□□□ -0.74
LDB3-204ENST00000372066 SLC25A34Q6PIV7 304 aa10.44□□□□□ -0.74
LDB3-204ENST00000372066 SMIM2Q9BVW6 85 aa10.44□□□□□ -0.74
LDB3-204ENST00000372066 hDV102S1A0JD36 115 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 A8MTW9 85 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 H0Y8G0 127 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 TFPI2P48307 235 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 ADARB2-AS1A8MUL3 147 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 GAS8-AS1O95177 125 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 GATA1P15976 413 aaPredicted RBP10.43□□□□□ -0.74
LDB3-204ENST00000372066 RPL32P62910 135 aaKnown RBP10.43□□□□□ -0.74
LDB3-204ENST00000372066 KIR3DS1Q14943 382 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 ORMDL2Q53FV1 153 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 OR9G4Q8NGQ1 327 aa10.43□□□□□ -0.74
LDB3-204ENST00000372066 A0A1W2PRX2 142 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 GNRH2O43555 120 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 SMIM17P0DL12 118 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 ZNF25P17030 456 aaPredicted RBP10.42□□□□□ -0.74
LDB3-204ENST00000372066 SLURP1P55000 103 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 SUMO2P61956 95 aaKnown RBP10.42□□□□□ -0.74
LDB3-204ENST00000372066 SYT8Q8NBV8 401 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 TMEM208Q9BTX3 173 aa10.42□□□□□ -0.74
LDB3-204ENST00000372066 TRAV12-3A0A0B4J271 114 aa10.41□□□□□ -0.74
LDB3-204ENST00000372066 LINC01549A6NIU2 74 aa10.41□□□□□ -0.74
LDB3-204ENST00000372066 CD7P09564 240 aa10.41□□□□□ -0.74
LDB3-204ENST00000372066 OR11H1Q8NG94 326 aa10.41□□□□□ -0.74
LDB3-204ENST00000372066 C9orf85Q96MD7 179 aa10.41□□□□□ -0.74
LDB3-204ENST00000372066 TRGV11A0A075B6L2 103 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 IGHV1OR15-1A0A075B7D0 117 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 TRAV26-2A0A0B4J265 109 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 COX8AP10176 69 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 G0S2P27469 103 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 ADAMTSL5Q6ZMM2 481 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 C14orf178Q8N769 122 aaPredicted RBP10.4□□□□□ -0.74
LDB3-204ENST00000372066 KLHL30-AS1Q8NEE0 82 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 WFDC9Q8NEX5 89 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 RASL10AQ92737 203 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 MUC4Q99102 2169 aa10.4□□□□□ -0.74
LDB3-204ENST00000372066 IGHV3-16A0A0C4DH30 117 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 MGPP08493 103 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 AMTNQ6UX39 209 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 DYNLRB2Q8TF09 96 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 SELENOKQ9Y6D0 94 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 KIF25-AS1Q9Y6Z4 181 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 TRAV25A0A0B4J276 109 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 HLA-DRB4P13762 266 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 BATFQ16520 125 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 KHDC1LQ5JSQ8 128 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 MCRIP2Q9BUT9 160 aaKnown RBP10.39□□□□□ -0.75
LDB3-204ENST00000372066 ZMAT4Q9H898 229 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 HLA-DRB4X5D2U9 266 aa10.39□□□□□ -0.75
LDB3-204ENST00000372066 PF4P02776 101 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 FXYD7P58549 80 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 ODF1Q14990 250 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 DEFB136Q30KP8 78 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 DEFB121Q5J5C9 76 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 C18orf65Q6ZTR6 163 aa10.38□□□□□ -0.75
LDB3-204ENST00000372066 NUDT3O95989 172 aa10.37□□□□□ -0.75
LDB3-204ENST00000372066 PRSS1P07477 247 aa10.37□□□□□ -0.75
LDB3-204ENST00000372066 SPINK13Q1W4C9 94 aa10.37□□□□□ -0.75
LDB3-204ENST00000372066 ORAOV1Q8WV07 137 aa10.37□□□□□ -0.75
LDB3-204ENST00000372066 C18orf15Q96N68 181 aa10.37□□□□□ -0.75
LDB3-204ENST00000372066 SPAG8Q99932 426 aaPredicted RBP10.37□□□□□ -0.75
LDB3-204ENST00000372066 K7EIL1 84 aa10.36□□□□□ -0.75
LDB3-204ENST00000372066 LINC00315P59091 139 aa10.36□□□□□ -0.75
LDB3-204ENST00000372066 DLX4Q92988 240 aaPredicted RBP10.36□□□□□ -0.75
LDB3-204ENST00000372066 CLUHP3Q96NS8 147 aa10.36□□□□□ -0.75
LDB3-204ENST00000372066 TSSC4Q9Y5U2 329 aaPredicted RBP10.36□□□□□ -0.75
LDB3-204ENST00000372066 TRAV12-1A0A0B4J245 112 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 DPM2O94777 84 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 IGKV3-20P01619 116 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 DEFB131AP59861 70 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 FHL3Q13643 280 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 TMEM61Q8N0U2 210 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 TOMM6Q96B49 74 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 TRAV12-2A0A075B6T6 113 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 TRBV6-5A0A0K0K1A5 114 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 H3BMM0 161 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP10.35□□□□□ -0.75
LDB3-204ENST00000372066 SIVA1O15304 175 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 IGKCP01834 107 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 DEFB114Q30KQ6 69 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 PIK3CD-AS1Q5SR53 167 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 Q8N1Y9 231 aa10.35□□□□□ -0.75
LDB3-204ENST00000372066 HINT1P49773 126 aaPredicted RBP10.34□□□□□ -0.75
LDB3-204ENST00000372066 KRTAP10-11P60412 298 aa10.34□□□□□ -0.75
LDB3-204ENST00000372066 ANKRD39Q53RE8 183 aa10.34□□□□□ -0.75
LDB3-204ENST00000372066 BOD1L2Q8IYS8 172 aa10.34□□□□□ -0.75
LDB3-204ENST00000372066 STPG4Q8N801 248 aa10.34□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 74.4 ms