RNA–Protein interactions for RNA: ENST00000371621.4

PTPN1-201, Transcript of protein tyrosine phosphatase, non-receptor type 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN1, Length 4,008 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN1-201ENST00000371621 HAMPP81172 84 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 COPS9Q8WXC6 57 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 PRO0461Q9UI25 63 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 CRPP02741 224 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 MYCNOSP40205 109 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 Q9HAA7 133 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 TNRC6BQ9UPQ9 1833 aaKnown RBP9.1□□□□□ -0.95
PTPN1-201ENST00000371621 IGLV2-11P01706 119 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 FHL3Q13643 280 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 LY6EQ16553 131 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 CTSZQ9UBR2 303 aa9.1□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1BA6NDE4 496 aaKnown RBP9.09□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1EA6NEQ0 496 aaKnown RBP9.09□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1DP0C7P1 496 aaKnown RBP9.09□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1A1P0DJD3 496 aaKnown RBP9.09□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1CP0DJD4 496 aa9.09□□□□□ -0.95
PTPN1-201ENST00000371621 RBMY1FQ15415 496 aaKnown RBP9.09□□□□□ -0.95
PTPN1-201ENST00000371621 C20orf197Q8N268 126 aa9.09□□□□□ -0.95
PTPN1-201ENST00000371621 LY6HO94772 140 aa9.09□□□□□ -0.95
PTPN1-201ENST00000371621 A0A0B4J2C4 111 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 INS-IGF2F8WCM5 200 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 PIP4P2Q8N4L2 257 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 RNF185Q96GF1 192 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 BUB1B-PAK6H3BSN5 160 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 LINC00643Q86TS7 51 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 IGHV3-38A0A0C4DH36 116 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 PRR30Q53SZ7 412 aaPredicted RBP9.08□□□□□ -0.96
PTPN1-201ENST00000371621 SLC25A29Q8N8R3 303 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 RASL10AQ92737 203 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 JPT2Q9H910 190 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 H3BT86 120 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 SOCS3O14543 225 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 PIFOQ8TCI5 191 aa9.08□□□□□ -0.96
PTPN1-201ENST00000371621 PRB2P02812 416 aaPredicted RBP9.07□□□□□ -0.96
PTPN1-201ENST00000371621 TMEM141Q96I45 108 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 TRAV23DV6A0A075B6W5 121 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 UBE2L6O14933 153 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 TOMM6Q96B49 74 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 K7EIM0 57 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 ACYP1P07311 99 aa9.07□□□□□ -0.96
PTPN1-201ENST00000371621 WT1P19544 449 aaPredicted RBP9.07□□□□□ -0.96
PTPN1-201ENST00000371621 NRGNQ92686 78 aa9.06□□□□□ -0.96
PTPN1-201ENST00000371621 NXPH4O95158 308 aa9.06□□□□□ -0.96
PTPN1-201ENST00000371621 Q6ZSV7 163 aa9.06□□□□□ -0.96
PTPN1-201ENST00000371621 TRAV12-2A0A075B6T6 113 aa9.06□□□□□ -0.96
PTPN1-201ENST00000371621 LOXP28300 417 aaPredicted RBP9.06□□□□□ -0.96
PTPN1-201ENST00000371621 CEMP1Q6PRD7 247 aaPredicted RBP9.06□□□□□ -0.96
PTPN1-201ENST00000371621 NEXN-AS1Q8NBZ9 246 aa9.06□□□□□ -0.96
PTPN1-201ENST00000371621 FRYQ5TBA9 3013 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 DAZ2Q13117 558 aaKnown RBP9.05□□□□□ -0.96
PTPN1-201ENST00000371621 DAZ4Q86SG3 579 aaKnown RBP9.05□□□□□ -0.96
PTPN1-201ENST00000371621 DAZ1Q9NQZ3 744 aaKnown RBP9.05□□□□□ -0.96
PTPN1-201ENST00000371621 DAZ3Q9NR90 486 aaKnown RBP9.05□□□□□ -0.96
PTPN1-201ENST00000371621 TMEM178BH3BS89 294 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 I3L2K1 104 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 IGHV3-30P01768 117 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 NHLRC4P0CG21 123 aaPredicted RBP9.05□□□□□ -0.96
PTPN1-201ENST00000371621 IGHV3-30-5P0DP03 117 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 PAX8Q06710 450 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 DEFB124Q8NES8 71 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 G3V318 75 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 LEPROTO15243 131 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 PFN2P35080 140 aa9.05□□□□□ -0.96
PTPN1-201ENST00000371621 UBE2D3P61077 147 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 UBE2D2P62837 147 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 TMEM219Q86XT9 240 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 C14orf132Q9NPU4 83 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 LAMTOR3Q9UHA4 124 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 KLK9Q9UKQ9 250 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 U3KQK5 164 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 TLN2Q9Y4G6 2542 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 FN1P02751 2386 aaKnown RBP9.04□□□□□ -0.96
PTPN1-201ENST00000371621 UBE2D1P51668 147 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 ZFHX2Q9C0A1 2572 aaPredicted RBP9.04□□□□□ -0.96
PTPN1-201ENST00000371621 ASPMQ8IZT6 3477 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 PTPRBP23467 1997 aa9.04□□□□□ -0.96
PTPN1-201ENST00000371621 Q9H8V8 135 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 FAM208BQ5VWN6 2430 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 IGHV3-16A0A0C4DH30 117 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 A8MZ25 164 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 MPLKIPQ8TAP9 179 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 I3L3M4 83 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 COX7CP15954 63 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 LINC01560Q8TB33 94 aa9.03□□□□□ -0.96
PTPN1-201ENST00000371621 RNASE6Q93091 150 aaKnown RBP9.03□□□□□ -0.96
PTPN1-201ENST00000371621 H7C423 109 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 MSMPQ1L6U9 139 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 PRRC2AP48634 2157 aaKnown RBP9.02□□□□□ -0.97
PTPN1-201ENST00000371621 IGLV3-9A0A075B6K5 115 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 PRSS33Q8NF86 280 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 ACACBO00763 2458 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 GHRHP01286 108 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 IGHV3-30-3P0DP02 117 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 Q6ZS92 163 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 C8orf31Q8N9H6 132 aa9.02□□□□□ -0.97
PTPN1-201ENST00000371621 A0A087WVE0 104 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 TRAV25A0A0B4J276 109 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 OVOL1O14753 267 aa9.01□□□□□ -0.97
PTPN1-201ENST00000371621 SNRPD3P62318 126 aaKnown RBP9.01□□□□□ -0.97
PTPN1-201ENST00000371621 C4orf26Q17RF5 130 aa9.01□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms