RNA–Protein interactions for RNA: ENST00000371121.4

SMARCA1-201, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SMARCA1, Length 3,564 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA1-201ENST00000371121 A0A0B4J2C4 111 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 SOCS3O14543 225 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 NXPH4O95158 308 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 TCF15Q12870 199 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 PRR30Q53SZ7 412 aaPredicted RBP8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 Q8N9W7 124 aa8.72□□□□□ -1.01
SMARCA1-201ENST00000371121 CACNA1BQ00975 2339 aa8.71□□□□□ -1.01
SMARCA1-201ENST00000371121 PMVKQ15126 192 aa8.71□□□□□ -1.01
SMARCA1-201ENST00000371121 SPTBN2O15020 2390 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 TMEM223A0PJW6 202 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 H7C2G1 150 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 SNCGO76070 127 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 FAM57AQ8TBR7 257 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 TIMD4Q96H15 378 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 ADAMTSL4-AS1Q5T5F5 129 aa8.71□□□□□ -1.02
SMARCA1-201ENST00000371121 IGHV4OR15-8A0A075B7B6 117 aa8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 A0A087WW49 117 aa8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 EBI3Q14213 229 aa8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 ZNF292O60281 2723 aa8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 CEMP1Q6PRD7 247 aaPredicted RBP8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 MRPL53Q96EL3 112 aaKnown RBP8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 VPREB3Q9UKI3 123 aa8.7□□□□□ -1.02
SMARCA1-201ENST00000371121 M0R2P5 195 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 HES1Q14469 280 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 APRG1Q8IVJ8 170 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 F6UB75 175 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 G3V318 75 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 MGPP08493 103 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 ZNF22P17026 224 aaPredicted RBP8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 ARL3P36405 182 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 VMO1Q7Z5L0 202 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 IGHV3-64A0A075B6Q5 118 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 IGHV1-69DA0A0B4J2H0 117 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 IGHV4-39P01824 125 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 TMEM170BQ5T4T1 132 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 SUMO4Q6EEV6 95 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 IGFL3Q6UXB1 125 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 SMCR5Q8TEV8 140 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 MED13LQ71F56 2210 aa8.69□□□□□ -1.02
SMARCA1-201ENST00000371121 TRBV10-2A0A0K0K1G8 114 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 DEFB121Q5J5C9 76 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 LYRM7Q5U5X0 104 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 CLEC19AQ6UXS0 136 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 MEIG1Q5JSS6 88 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 TIMM17AQ99595 171 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 TRBV30A0A0K0K1B3 111 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 ATP6V0E1O15342 81 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 DUX3Q96PT4 197 aa8.68□□□□□ -1.02
SMARCA1-201ENST00000371121 TRAV2A0A0B4J234 112 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 UNQ9165/PRO28630Q6UXU0 137 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 HIF1ANQ9NWT6 349 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 ADARB2-AS1A8MUL3 147 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 UBE2E1P51965 193 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 DYNLRB1Q9NP97 96 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 C22orf24Q9Y442 160 aa8.67□□□□□ -1.02
SMARCA1-201ENST00000371121 A0A0J9YXY3 114 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 TRBV27A0A0K0K1C4 114 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 FOXC1Q12948 553 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 PRRC2AP48634 2157 aaKnown RBP8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 FAM110DQ8TAY7 271 aaPredicted RBP8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 CLEC2BQ92478 149 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 TRAV8-4A0A0B4J246 113 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 TRBV7-7A0A0K0K1E9 115 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 LEPROTO15243 131 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 TRBV12-3P01733 135 aa8.66□□□□□ -1.02
SMARCA1-201ENST00000371121 A0A087WWL8 130 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 ATXN8Q156A1 80 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 PHLDA3Q9Y5J5 127 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 H3BMM0 161 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 EDN2P20800 178 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 OR10J6PQ8NGY7 276 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 UBE2WQ96B02 151 aa8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 BEX4Q9NWD9 120 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 MAP1AP78559 2803 aaPredicted RBP8.65□□□□□ -1.02
SMARCA1-201ENST00000371121 A8MZ25 164 aa8.65□□□□□ -1.03
SMARCA1-201ENST00000371121 ID1P41134 155 aa8.65□□□□□ -1.03
SMARCA1-201ENST00000371121 LINC00527Q9UJ94 153 aa8.65□□□□□ -1.03
SMARCA1-201ENST00000371121 TMEM141Q96I45 108 aa8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 LENEPQ9Y5L5 61 aa8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 A0A0J9YX75 114 aa8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 ZFP36P26651 326 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 RNASE4P34096 147 aaKnown RBP8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 ECSCRQ19T08 205 aa8.64□□□□□ -1.03
SMARCA1-201ENST00000371121 SDHAF1A6NFY7 115 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 MED14OSP0DP75 135 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 CYSTM1Q9H1C7 97 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 A0A0J9YXV3 536 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 GRNP28799 593 aaKnown RBP8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 C19orf54Q5BKX5 351 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 PAPPA-AS1Q5QFB9 102 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 SDIM1Q6ZPB5 146 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 HERVK_113P61574 105 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 ICOSQ9Y6W8 199 aa8.63□□□□□ -1.03
SMARCA1-201ENST00000371121 C16orf92Q96LL3 132 aa8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 TRAV8-3A0A0A6YYJ7 113 aa8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 TRAV21A0A0B4J279 112 aa8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 ZNF56Q15929 161 aa8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 MAP1BP46821 2468 aaKnown RBP8.62□□□□□ -1.03
SMARCA1-201ENST00000371121 LGALS3P17931 250 aaKnown RBP8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 121.8 ms