RNA–Protein interactions for RNA: ENST00000370651.5

PTP4A1-201, Transcript of protein tyrosine phosphatase type IVA, member 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTP4A1, Length 5,088 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1-201ENST00000370651 NKAPP1Q8N9T2 125 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 TP73-AS1Q9UF72 201 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 FAM236AA0A1B0GUQ0 79 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 FAM236BA0A1B0GV22 79 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 CGB3P0DN86 165 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 CGB7P0DN87 165 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 NOP10Q9NPE3 64 aaKnown RBP13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 TRBV10-2A0A0K0K1G8 114 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 CDK2AP2O75956 126 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 XCL1P47992 114 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 CLPSL2Q6UWE3 100 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 FAM208BQ5VWN6 2430 aa13.2□□□□□ -0.3
PTP4A1-201ENST00000370651 TRAV26-1A0A087WT03 109 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 A0A0B4J2C4 111 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 PIFOQ8TCI5 191 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 H0YGX0 51 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 SND1-IT1Q9HBX3 110 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 IGHV4-59P01825 116 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 SEM1Q6ZVN7 128 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 BDP1A6H8Y1 2624 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 MED12LQ86YW9 2145 aa13.19□□□□□ -0.3
PTP4A1-201ENST00000370651 A0A096LPF7 62 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 H3BT86 120 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 C5orf38Q86SI9 138 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 FANCD2OSQ96PS1 177 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 Q8N1Y9 231 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 EIF4EBP1Q13541 118 aaPredicted RBP13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 DEFB112Q30KQ8 113 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 DAND5Q8N907 189 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 PCNX3Q9H6A9 2034 aa13.18□□□□□ -0.3
PTP4A1-201ENST00000370651 ZNF80P51504 273 aaPredicted RBP13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 BLCAPP62952 87 aa13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 NDUFA11Q86Y39 141 aa13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 PLXNB1O43157 2135 aa13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 ZFHX2Q9C0A1 2572 aaPredicted RBP13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 ATOX1O00244 68 aa13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 RBM3P98179 157 aaKnown RBP13.17□□□□□ -0.3
PTP4A1-201ENST00000370651 TRAV4A0A0B4J268 109 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 Q8N7P7 452 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 C5orf56Q8N8D9 126 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 SPRY4Q9C004 299 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 ATRXP46100 2492 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 UBE2DNLQ8IWF7 75 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 VPREB3Q9UKI3 123 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 WNK1Q9H4A3 2382 aa13.16□□□□□ -0.3
PTP4A1-201ENST00000370651 SP5Q6BEB4 398 aaPredicted RBP13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 RNF152Q8N8N0 203 aa13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 PSCAO43653 123 aa13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 DEFB1P60022 68 aa13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 LINC00574Q9H8X3 128 aa13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 LGALS9O00182 355 aa13.15□□□□□ -0.3
PTP4A1-201ENST00000370651 IGKV3D-7A0A0C4DH55 119 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 DEFB136Q30KP8 78 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 CLEC2BQ92478 149 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 A0A1B0GX51 115 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 IGLC6P0CF74 106 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 APRG1Q8IVJ8 170 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 RBX1P62877 108 aa13.14□□□□□ -0.31
PTP4A1-201ENST00000370651 PRR14LQ5THK1 2151 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 TCL1BO95988 128 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 C1orf229Q6ZS94 237 aaPredicted RBP13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 TM2D2Q9BX73 214 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 IGHV4-38-2P0DP08 117 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 C20orf203Q8NBC4 194 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 Q96MF0 132 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 KIAA1549LQ6ZVL6 1849 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 MRAPQ8TCY5 172 aa13.13□□□□□ -0.31
PTP4A1-201ENST00000370651 IGHV4-61A0A0C4DH41 118 aa13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 DSCAML1Q8TD84 2053 aa13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 DAZ2Q13117 558 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 DAZ4Q86SG3 579 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 DAZ3Q9NR90 486 aaKnown RBP13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 K7EQD1 137 aa13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 Q6ZUT4 128 aa13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 VSIG2Q96IQ7 327 aa13.12□□□□□ -0.31
PTP4A1-201ENST00000370651 K7EMT4 169 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 WISP2O76076 250 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 IGHV1-58A0A0C4DH39 117 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 ACACBO00763 2458 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 SLURP1P55000 103 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 A0A1W2PNU3 283 aaPredicted RBP13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 TMEM258P61165 79 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 COX7B2Q8TF08 81 aa13.11□□□□□ -0.31
PTP4A1-201ENST00000370651 SPANXB1Q9NS25 103 aaPredicted RBP13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 ADAMTS9Q9P2N4 1935 aa13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 IGHV3-30-3P0DP02 117 aa13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 APOC4P55056 127 aa13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 HIST2H2BCQ6DN03 193 aa13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 OPRPNQ99935 248 aaPredicted RBP13.1□□□□□ -0.31
PTP4A1-201ENST00000370651 Q71RC1 249 aaPredicted RBP13.09□□□□□ -0.31
PTP4A1-201ENST00000370651 PCDH15Q96QU1 1955 aa13.09□□□□□ -0.31
PTP4A1-201ENST00000370651 NBL1P41271 181 aa13.09□□□□□ -0.31
PTP4A1-201ENST00000370651 Q6ZQT7 251 aa13.09□□□□□ -0.31
PTP4A1-201ENST00000370651 C3orf56Q8N813 242 aa13.09□□□□□ -0.31
PTP4A1-201ENST00000370651 UNQ9165/PRO28630Q6UXU0 137 aa13.08□□□□□ -0.32
PTP4A1-201ENST00000370651 J3KT08 172 aa13.08□□□□□ -0.32
PTP4A1-201ENST00000370651 ZFP36P26651 326 aaKnown RBP13.08□□□□□ -0.32
PTP4A1-201ENST00000370651 MDFICQ9P1T7 246 aa13.08□□□□□ -0.32
PTP4A1-201ENST00000370651 RNF183Q96D59 192 aa13.08□□□□□ -0.32
PTP4A1-201ENST00000370651 TRBV7-3A0A075B6L6 115 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms