RNA–Protein interactions for RNA: ENST00000369406.7

HMGCS2-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS2, Length 2,428 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS2-201ENST00000369406 NBEAL1Q6ZS30 2694 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 CBY3A6NI87 242 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 INSP01308 110 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 ESDP10768 282 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 FAM19A2Q8N3H0 131 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 KIF25-AS1Q9Y6Z4 181 aa10.25□□□□□ -0.77
HMGCS2-201ENST00000369406 LINC00315P59091 139 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 PMCHL1Q16048 86 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 C11orf72Q8NBR9 251 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 SAMD10Q9BYL1 202 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 IGHV3OR16-12A0A075B7B8 117 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 INSL3P51460 131 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 NIT1Q86X76 327 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 C3orf56Q8N813 242 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 PRELID3AQ96N28 172 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 LINC01587Q99440 93 aa10.24□□□□□ -0.77
HMGCS2-201ENST00000369406 CKS2P33552 79 aa10.23□□□□□ -0.77
HMGCS2-201ENST00000369406 RNASEKQ6P5S7 137 aaKnown RBP10.23□□□□□ -0.77
HMGCS2-201ENST00000369406 CSNK1G2-AS1Q8NCQ2 148 aa10.23□□□□□ -0.77
HMGCS2-201ENST00000369406 A0A087WWL8 130 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 KIR2DL5BA0A0G2JN68 375 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 KIR2DL5BA0A0G2JPC4 375 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 LOC389332A0A1B0GUA5 103 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 ZNF705AQ6ZN79 300 aaPredicted RBP10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 KIR2DL5AQ8N109 375 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 ORMDL3Q8N138 153 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 PMCHP20382 165 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 CMC4P56277 68 aaPredicted RBP10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 OXLD1Q5BKU9 147 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 NRACQ8N912 160 aa10.22□□□□□ -0.77
HMGCS2-201ENST00000369406 TRGV11A0A075B6L2 103 aa10.21□□□□□ -0.77
HMGCS2-201ENST00000369406 IFI27P40305 119 aaPredicted RBP10.21□□□□□ -0.77
HMGCS2-201ENST00000369406 WIPF1O43516 503 aa10.21□□□□□ -0.78
HMGCS2-201ENST00000369406 SCGB1D1O95968 90 aa10.21□□□□□ -0.78
HMGCS2-201ENST00000369406 C12orf54Q6X4T0 127 aa10.21□□□□□ -0.78
HMGCS2-201ENST00000369406 Q6ZWC4 215 aa10.21□□□□□ -0.78
HMGCS2-201ENST00000369406 TMEM18Q96B42 140 aa10.21□□□□□ -0.78
HMGCS2-201ENST00000369406 LINC00467Q9BRT7 94 aa10.2□□□□□ -0.78
HMGCS2-201ENST00000369406 TNFRSF6BO95407 300 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 MGPP08493 103 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 KRTAP10-11P60412 298 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 GTSCR1Q86UQ5 136 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 RPL39LQ96EH5 51 aaKnown RBP10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 AP1S3Q96PC3 154 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 DPH3P1Q9H4G8 78 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 CRYGDP07320 174 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 ZNF876PQ49A33 203 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 SHISA2Q6UWI4 295 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 RASL10AQ92737 203 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 C20orf144Q9BQM9 153 aa10.19□□□□□ -0.78
HMGCS2-201ENST00000369406 AMTP48728 403 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 LINC00173Q6ZV60 143 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 POM121L12Q8N7R1 296 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 IL17DQ8TAD2 202 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 IGHV1-24A0A0C4DH33 117 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 RBX1P62877 108 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 BATFQ16520 125 aa10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 RNASE8Q8TDE3 154 aaKnown RBP10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 MCRIP2Q9BUT9 160 aaKnown RBP10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 MRPL16Q9NX20 251 aaKnown RBP10.18□□□□□ -0.78
HMGCS2-201ENST00000369406 A0A096LNJ9 63 aa10.17□□□□□ -0.78
HMGCS2-201ENST00000369406 PLAC8L1A1L4L8 177 aa10.17□□□□□ -0.78
HMGCS2-201ENST00000369406 FAM74A4Q5TZK3 123 aa10.17□□□□□ -0.78
HMGCS2-201ENST00000369406 SMIM15Q7Z3B0 74 aa10.17□□□□□ -0.78
HMGCS2-201ENST00000369406 IGLV2-18A0A075B6J9 118 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 ZNF415Q09FC8 603 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 SUMO4Q6EEV6 95 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 MRPL52Q86TS9 123 aaKnown RBP10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 TENM3Q9P273 2699 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 IGHV3-73A0A0B4J1V6 119 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 HSBP1O75506 76 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 TMEM158Q8WZ71 300 aa10.16□□□□□ -0.78
HMGCS2-201ENST00000369406 PPBPP02775 128 aa10.15□□□□□ -0.78
HMGCS2-201ENST00000369406 MORN3Q6PF18 240 aaPredicted RBP10.15□□□□□ -0.78
HMGCS2-201ENST00000369406 MGAM2Q2M2H8 2515 aa10.15□□□□□ -0.78
HMGCS2-201ENST00000369406 M0R2P5 195 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 UFSP1Q6NVU6 142 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 Q6ZSN1 163 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 SYT8Q8NBV8 401 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 PRSS3P2Q8NHM4 247 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 CHCHD1Q96BP2 118 aaKnown RBP10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 MRAP2Q96G30 205 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 MDFIQ99750 246 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 CSTL1Q9H114 145 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 Q9UF83 564 aa10.15□□□□□ -0.79
HMGCS2-201ENST00000369406 DEFB104AQ8WTQ1 72 aa10.14□□□□□ -0.79
HMGCS2-201ENST00000369406 NEGR1Q7Z3B1 354 aa10.14□□□□□ -0.79
HMGCS2-201ENST00000369406 SPATA12Q7Z6I5 190 aa10.14□□□□□ -0.79
HMGCS2-201ENST00000369406 Q6ZTI0 123 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 Q8N976 141 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 MIEN1Q9BRT3 115 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 MAP1LC3AQ9H492 121 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 AP5S1Q9NUS5 200 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 G3V4G9 280 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 P0DMU3 169 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 FAM231AP0DMU4 169 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 FAM231CP0DMU5 169 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 CFAP126Q5VTH2 177 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 FA2HQ7L5A8 372 aa10.13□□□□□ -0.79
HMGCS2-201ENST00000369406 TMEM263Q8WUH6 116 aaKnown RBP10.13□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 91.2 ms