RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 MYCBP2O75592 4640 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 MBP02144 154 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 Q6ZSA8 131 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 ACTR3CQ9C0K3 210 aaPredicted RBP6.82□□□□□ -1.32
CLRN3-201ENST00000368671 ALG5Q9Y673 324 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 URGCP-MRPS24S4R325 110 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 ARL2-SNX15V9GYD0 113 aa6.82□□□□□ -1.32
CLRN3-201ENST00000368671 IGKV2D-24A0A075B6R9 120 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 A0A087WWC5 75 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 RBFOX3A6NFN3 312 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 FABP5P3A8MUU1 101 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 B4DEV8 164 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 H3BVH4 76 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 IFNA7P01567 189 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 FGF8P55075 233 aaPredicted RBP6.81□□□□□ -1.32
CLRN3-201ENST00000368671 UBE2G2P60604 165 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 SERF2P84101 59 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 FAM74A4Q5TZK3 123 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 RMI2Q96E14 147 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 DNAJC30Q96LL9 226 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 AQP10Q96PS8 301 aa6.81□□□□□ -1.32
CLRN3-201ENST00000368671 A0A1W2PRE2 83 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 GRIFINA4D1Z8 144 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 M0R036 132 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 ARMS2P0C7Q2 107 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 PIK3CD-AS1Q5SR53 167 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 UFSP1Q6NVU6 142 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 SCXQ7RTU7 201 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 Q86TA4 180 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 DEFB104AQ8WTQ1 72 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 IL36BQ9NZH7 164 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 KLK12Q9UKR0 248 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 TNFSF18Q9UNG2 199 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 COX11Q9Y6N1 276 aa6.8□□□□□ -1.32
CLRN3-201ENST00000368671 A0A087WWL8 130 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 KRTAP29-1A8MX34 341 aaPredicted RBP6.79□□□□□ -1.32
CLRN3-201ENST00000368671 RHODO00212 210 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 PEX7O00628 323 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 ZNF726P1Q15940 193 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 NIT1Q86X76 327 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 OR11H4Q8NGC9 324 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 UBE2WQ96B02 151 aa6.79□□□□□ -1.32
CLRN3-201ENST00000368671 TMSB15BA0A087X1C1 80 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 C9orf118A6NHY6 69 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 KRBOX1C9JBD0 128 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 M0R381 172 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 SH2D1AO60880 128 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 SEC11BP0C7V7 166 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 CRIP1P50238 77 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 Q5BKY6 102 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 RPL7L1Q6DKI1 246 aaKnown RBP6.78□□□□□ -1.32
CLRN3-201ENST00000368671 KCNIP4Q6PIL6 250 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 Q8N976 141 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 ZC2HC1AQ96GY0 325 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 MED28Q9H204 178 aa6.78□□□□□ -1.32
CLRN3-201ENST00000368671 SRRM2Q9UQ35 2752 aaKnown RBP6.77□□□□□ -1.33
CLRN3-201ENST00000368671 A0A087WX48 190 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 BORCS7-ASMTA0A0B4J1R7 106 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 CTXND1A0A1B0GTU2 59 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 RNF222A6NCQ9 220 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 ZNF561-AS1K7EIQ3 104 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 TPT1P13693 172 aaKnown RBP6.77□□□□□ -1.33
CLRN3-201ENST00000368671 DNLZQ5SXM8 178 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 SFRP2Q96HF1 295 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 PHLDA3Q9Y5J5 127 aa6.77□□□□□ -1.33
CLRN3-201ENST00000368671 DMBT1Q9UGM3 2413 aaPredicted RBP6.77□□□□□ -1.33
CLRN3-201ENST00000368671 FAM74A7A6NL05 159 aa6.76□□□□□ -1.33
CLRN3-201ENST00000368671 UBE2G1P62253 170 aa6.76□□□□□ -1.33
CLRN3-201ENST00000368671 RPL36AP83881 106 aaKnown RBP6.76□□□□□ -1.33
CLRN3-201ENST00000368671 ELOBQ15370 118 aa6.76□□□□□ -1.33
CLRN3-201ENST00000368671 INO80EQ8NBZ0 244 aaPredicted RBP6.76□□□□□ -1.33
CLRN3-201ENST00000368671 RPL36ALQ969Q0 106 aaKnown RBP6.76□□□□□ -1.33
CLRN3-201ENST00000368671 HIST1H2BAQ96A08 127 aa6.76□□□□□ -1.33
CLRN3-201ENST00000368671 CHAC1Q9BUX1 264 aa6.76□□□□□ -1.33
CLRN3-201ENST00000368671 FLG2Q5D862 2391 aaPredicted RBP6.76□□□□□ -1.33
CLRN3-201ENST00000368671 FXYD6-FXYD2A0A087WZ82 144 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 TMEM262E9PQX1 116 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 AKR1C8PQ5T2L2 129 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 FAM162BQ5T6X4 162 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 ZFP82Q8N141 532 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 CIRBP-AS1Q8TBR5 109 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 FMC1Q96HJ9 113 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 CHCHD7Q9BUK0 85 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 NKX6-2Q9C056 277 aaPredicted RBP6.75□□□□□ -1.33
CLRN3-201ENST00000368671 ZFP30Q9Y2G7 519 aa6.75□□□□□ -1.33
CLRN3-201ENST00000368671 TRBV7-3A0A075B6L6 115 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 TRBV10-1A0A0K0K1A3 114 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 CRPP02741 224 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 GIPP09681 153 aaPredicted RBP6.74□□□□□ -1.33
CLRN3-201ENST00000368671 UBE2D3P61077 147 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 UBE2D2P62837 147 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 Q0VG73 95 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 C15orf54Q8N8G6 183 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 C1orf43Q9BWL3 253 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 KRTAP4-9Q9BYQ8 210 aa6.74□□□□□ -1.33
CLRN3-201ENST00000368671 MAP1LC3B2A6NCE7 125 aa6.73□□□□□ -1.33
CLRN3-201ENST00000368671 IGLV2-8P01709 118 aa6.73□□□□□ -1.33
CLRN3-201ENST00000368671 AKR1C3P42330 323 aa6.73□□□□□ -1.33
CLRN3-201ENST00000368671 KRTAP10-4P60372 401 aaPredicted RBP6.73□□□□□ -1.33
CLRN3-201ENST00000368671 ZNF56Q15929 161 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms