RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 SH2D1AO60880 128 aa10.54□□□□□ -0.72
CKS1B-202ENST00000368436 PLA2G1BP04054 148 aaKnown RBP10.54□□□□□ -0.72
CKS1B-202ENST00000368436 OR11H4Q8NGC9 324 aa10.54□□□□□ -0.72
CKS1B-202ENST00000368436 BAALCQ8WXS3 180 aa10.54□□□□□ -0.72
CKS1B-202ENST00000368436 SFRP2Q96HF1 295 aa10.54□□□□□ -0.72
CKS1B-202ENST00000368436 IGLV2-33A0A075B6J2 118 aaPredicted RBP10.53□□□□□ -0.72
CKS1B-202ENST00000368436 TRBV6-1A0A0K0K1D8 114 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 GRIFINA4D1Z8 144 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 M0R036 132 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 ZNF674Q2M3X9 581 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 FAM162BQ5T6X4 162 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 RMI2Q96E14 147 aa10.53□□□□□ -0.72
CKS1B-202ENST00000368436 SEC11BP0C7V7 166 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 LINC01559Q495D7 138 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 FAM74A4Q5TZK3 123 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 LINC00528Q8N1L1 170 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 Q8N976 141 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 FMC1Q96HJ9 113 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 DNAJC30Q96LL9 226 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 PHLDA3Q9Y5J5 127 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 URGCP-MRPS24S4R325 110 aa10.52□□□□□ -0.73
CKS1B-202ENST00000368436 A0A087WWL8 130 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 FXYD6-FXYD2A0A087WZ82 144 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 J3QL48 77 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 TPT1P13693 172 aaKnown RBP10.51□□□□□ -0.73
CKS1B-202ENST00000368436 AKR1C8PQ5T2L2 129 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 CHCHD7Q9BUK0 85 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 KLK12Q9UKR0 248 aa10.51□□□□□ -0.73
CKS1B-202ENST00000368436 IGKV2D-24A0A075B6R9 120 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 TRBV10-1A0A0K0K1A3 114 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 KRTAP29-1A8MX34 341 aaPredicted RBP10.5□□□□□ -0.73
CKS1B-202ENST00000368436 FHITP49789 147 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 LINC01620Q4KN68 170 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 ATRAIDQ6UW56 229 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 ZFP82Q8N141 532 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 TCEAL7Q9BRU2 100 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 BATF3Q9NR55 127 aa10.5□□□□□ -0.73
CKS1B-202ENST00000368436 MAP1LC3B2A6NCE7 125 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 RBFOX3A6NFN3 312 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 G3V3Q6 166 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 M0R381 172 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 LTAP01374 205 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 UBE2D3P61077 147 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 UBE2G1P62253 170 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 UBE2D2P62837 147 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 ELOBQ15370 118 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 DEFB104AQ8WTQ1 72 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 MAP1LC3BQ9GZQ8 125 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 CYTL1Q9NRR1 136 aa10.49□□□□□ -0.73
CKS1B-202ENST00000368436 TRBV7-3A0A075B6L6 115 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 A0A087WX48 190 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 TMSB15BA0A087X1C1 80 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 RPL36AP83881 106 aaKnown RBP10.48□□□□□ -0.73
CKS1B-202ENST00000368436 SCXQ7RTU7 201 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 OR10G8Q8NGN5 311 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 RPL36ALQ969Q0 106 aaKnown RBP10.48□□□□□ -0.73
CKS1B-202ENST00000368436 UBE2WQ96B02 151 aa10.48□□□□□ -0.73
CKS1B-202ENST00000368436 Q0VG73 95 aa10.46□□□□□ -0.73
CKS1B-202ENST00000368436 CST9LP1Q5W188 147 aa10.46□□□□□ -0.73
CKS1B-202ENST00000368436 STOML3Q8TAV4 291 aa10.46□□□□□ -0.73
CKS1B-202ENST00000368436 CHAC1Q9BUX1 264 aa10.46□□□□□ -0.73
CKS1B-202ENST00000368436 KRTAP10-4P60372 401 aaPredicted RBP10.45□□□□□ -0.74
CKS1B-202ENST00000368436 RAB4BP61018 213 aa10.45□□□□□ -0.74
CKS1B-202ENST00000368436 KCNIP4Q6PIL6 250 aa10.45□□□□□ -0.74
CKS1B-202ENST00000368436 TRBV6-8A0A0A6YYG3 113 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 ARPC5O15511 151 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 CXCL1P09341 107 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 AKR1C3P42330 323 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 PRR27Q6MZM9 219 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 ENHOQ6UWT2 76 aa10.44□□□□□ -0.74
CKS1B-202ENST00000368436 PAGE4O60829 102 aa10.43□□□□□ -0.74
CKS1B-202ENST00000368436 S100A9P06702 114 aaKnown RBP10.43□□□□□ -0.74
CKS1B-202ENST00000368436 NEXN-AS1Q8NBZ9 246 aa10.43□□□□□ -0.74
CKS1B-202ENST00000368436 CIRBP-AS1Q8TBR5 109 aa10.43□□□□□ -0.74
CKS1B-202ENST00000368436 MLST8Q9BVC4 326 aa10.43□□□□□ -0.74
CKS1B-202ENST00000368436 TMEM262E9PQX1 116 aa10.42□□□□□ -0.74
CKS1B-202ENST00000368436 C14orf177Q52M58 125 aa10.42□□□□□ -0.74
CKS1B-202ENST00000368436 OR10AG1Q8NH19 301 aa10.42□□□□□ -0.74
CKS1B-202ENST00000368436 MBD3L1Q8WWY6 194 aa10.42□□□□□ -0.74
CKS1B-202ENST00000368436 SSBP4Q9BWG4 385 aaPredicted RBP10.42□□□□□ -0.74
CKS1B-202ENST00000368436 C1orf43Q9BWL3 253 aa10.42□□□□□ -0.74
CKS1B-202ENST00000368436 SNAI2O43623 268 aa10.41□□□□□ -0.74
CKS1B-202ENST00000368436 RPL19P84098 196 aaKnown RBP10.41□□□□□ -0.74
CKS1B-202ENST00000368436 ZNF56Q15929 161 aa10.41□□□□□ -0.74
CKS1B-202ENST00000368436 MPV17L2Q567V2 206 aa10.41□□□□□ -0.74
CKS1B-202ENST00000368436 ZNF471Q9BX82 626 aaPredicted RBP10.41□□□□□ -0.74
CKS1B-202ENST00000368436 LRP1Q07954 4544 aaKnown RBP10.4□□□□□ -0.75
CKS1B-202ENST00000368436 IGLV2-8P01709 118 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 CRPP02741 224 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 OR5AL1P0C617 328 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 BAGE2Q86Y30 109 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 KCNRGQ8N5I3 272 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 C15orf54Q8N8G6 183 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 SFT2D1Q8WV19 159 aa10.39□□□□□ -0.75
CKS1B-202ENST00000368436 SCO2A0A1W2PP80 73 aa10.38□□□□□ -0.75
CKS1B-202ENST00000368436 UMAD1C9J7I0 102 aa10.38□□□□□ -0.75
CKS1B-202ENST00000368436 ANGP03950 147 aaKnown RBP10.38□□□□□ -0.75
CKS1B-202ENST00000368436 PKIAP61925 76 aa10.38□□□□□ -0.75
CKS1B-202ENST00000368436 NTM-AS1Q6ZSK4 140 aa10.38□□□□□ -0.75
CKS1B-202ENST00000368436 VAX2Q9UIW0 290 aa10.38□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 90.7 ms