RNA–Protein interactions for RNA: ENST00000368406.2

EFNA1-201, Transcript of ephrin A1, humanhuman

TSL 1 (best) BASIC

Gene EFNA1, Length 1,444 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EFNA1-201ENST00000368406 KCNIP4Q6PIL6 250 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 NUP35Q8NFH5 326 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 ZNF479Q96JC4 524 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 C18orf15Q96N68 181 aa8.95□□□□□ -0.98
EFNA1-201ENST00000368406 DYNC2H1Q8NCM8 4307 aaKnown RBP8.94□□□□□ -0.98
EFNA1-201ENST00000368406 RS1O15537 224 aa8.94□□□□□ -0.98
EFNA1-201ENST00000368406 MGPP08493 103 aa8.94□□□□□ -0.98
EFNA1-201ENST00000368406 RIGQ13278 110 aa8.94□□□□□ -0.98
EFNA1-201ENST00000368406 ZNF56Q15929 161 aa8.94□□□□□ -0.98
EFNA1-201ENST00000368406 JPT2Q9H910 190 aa8.94□□□□□ -0.98
EFNA1-201ENST00000368406 SACSQ9NZJ4 4579 aa8.93□□□□□ -0.98
EFNA1-201ENST00000368406 LCE6AA0A183 80 aa8.93□□□□□ -0.98
EFNA1-201ENST00000368406 WDR73Q6P4I2 378 aa8.93□□□□□ -0.98
EFNA1-201ENST00000368406 C14orf178Q8N769 122 aaPredicted RBP8.93□□□□□ -0.98
EFNA1-201ENST00000368406 MSRB1Q9NZV6 116 aa8.93□□□□□ -0.98
EFNA1-201ENST00000368406 LYSTQ99698 3801 aa8.93□□□□□ -0.98
EFNA1-201ENST00000368406 RYR3Q15413 4870 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 A0A087WWC5 75 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 A0A0J9YY99 117 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 IGLL5B9A064 214 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 F5H697 171 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 CIDEAO60543 219 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 HOXA5P20719 270 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 FOXA3P55318 350 aaPredicted RBP8.92□□□□□ -0.98
EFNA1-201ENST00000368406 TCTAP57738 103 aa8.92□□□□□ -0.98
EFNA1-201ENST00000368406 FAM3BP58499 235 aaPredicted RBP8.92□□□□□ -0.98
EFNA1-201ENST00000368406 MRPL54Q6P161 138 aaKnown RBP8.92□□□□□ -0.98
EFNA1-201ENST00000368406 IGHV4-4A0A075B6R2 117 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 TRAV26-1A0A087WT03 109 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 CAMPP49913 170 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 SLAQ13239 276 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 TMEM88Q6PEY1 159 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 ZFP2Q6ZN57 461 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 POM121L12Q8N7R1 296 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 CNFNQ9BYD5 112 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 SAMD10Q9BYL1 202 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 DPH3P1Q9H4G8 78 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 HHLA3Q9XRX5 114 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 URGCP-MRPS24S4R325 110 aa8.91□□□□□ -0.98
EFNA1-201ENST00000368406 PAX4O43316 350 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 S100A8P05109 93 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 FHL2Q14192 279 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 BTF3L4Q96K17 158 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 IMMP2LQ96T52 175 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 PRO0255Q9UI72 69 aa8.9□□□□□ -0.98
EFNA1-201ENST00000368406 A0A1B0GW15 77 aa8.89□□□□□ -0.99
EFNA1-201ENST00000368406 EVI2AP22794 236 aa8.89□□□□□ -0.99
EFNA1-201ENST00000368406 HBBP68871 147 aa8.89□□□□□ -0.99
EFNA1-201ENST00000368406 PRADC1Q9BSG0 188 aa8.89□□□□□ -0.99
EFNA1-201ENST00000368406 TMEM242Q9NWH2 141 aa8.89□□□□□ -0.99
EFNA1-201ENST00000368406 K7EQD1 137 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 NUDT3O95989 172 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 CRYGDP07320 174 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 GATA1P15976 413 aaPredicted RBP8.88□□□□□ -0.99
EFNA1-201ENST00000368406 RAB4BP61018 213 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 RHOHQ15669 191 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 ATP5L2Q7Z4Y8 100 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 FAM210BQ96KR6 192 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 NACAE9PAV3 2078 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 CRYBA4P53673 196 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 C15orf53Q8NAA6 179 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 ICOSQ9Y6W8 199 aa8.88□□□□□ -0.99
EFNA1-201ENST00000368406 RYR2Q92736 4967 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 DNAH1Q9P2D7 4330 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 TRAV9-1A0A075B6T8 112 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 TRBV6-4A0A1B0GX49 114 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 H7C1H1 209 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 GYPEP15421 78 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 UFSP1Q6NVU6 142 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 SLC25A29Q8N8R3 303 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 TMEM191AQ9H0A3 160 aa8.87□□□□□ -0.99
EFNA1-201ENST00000368406 SRIP30626 198 aa8.86□□□□□ -0.99
EFNA1-201ENST00000368406 ATRAIDQ6UW56 229 aa8.86□□□□□ -0.99
EFNA1-201ENST00000368406 LINC00476Q8WZB0 136 aa8.86□□□□□ -0.99
EFNA1-201ENST00000368406 APLNQ9ULZ1 77 aa8.86□□□□□ -0.99
EFNA1-201ENST00000368406 ATP6V1G1O75348 118 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 LGALS9CQ6DKI2 356 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 SUMO4Q6EEV6 95 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 Q6ZSN1 163 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 AMN1Q8IY45 258 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 VSIG2Q96IQ7 327 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 KIF25-AS1Q9Y6Z4 181 aa8.85□□□□□ -0.99
EFNA1-201ENST00000368406 LOC100131303A0A0U1RQF7 123 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 A0A1B0GXF2 115 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 GAGE12JA6NER3 117 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 H3BNG1 76 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 GAGE1Q13065 139 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 GAGE4Q13068 117 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 GAGE5Q13069 117 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 MRPL23Q16540 153 aaKnown RBP8.84□□□□□ -0.99
EFNA1-201ENST00000368406 GAGE13Q4V321 117 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 SMCO4Q9NRQ5 59 aa8.84□□□□□ -0.99
EFNA1-201ENST00000368406 A0A096LPF7 62 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 TRAV26-2A0A0B4J265 109 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 P0DMU3 169 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 FAM231AP0DMU4 169 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 FAM231CP0DMU5 169 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 S100A1P23297 94 aa8.83□□□□□ -1
EFNA1-201ENST00000368406 RPL36AP83881 106 aaKnown RBP8.83□□□□□ -1
EFNA1-201ENST00000368406 RASL11AQ6T310 242 aa8.83□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 79.7 ms