RNA–Protein interactions for RNA: ENST00000368309.3

UBQLN4-201, Transcript of ubiquilin 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene UBQLN4, Length 3,576 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBQLN4-201ENST00000368309 PPP1R17O96001 155 aa13.46□□□□□ -0.25
UBQLN4-201ENST00000368309 SAMD5Q5TGI4 173 aa13.46□□□□□ -0.25
UBQLN4-201ENST00000368309 Q8N1Y9 231 aa13.46□□□□□ -0.25
UBQLN4-201ENST00000368309 SPCS1Q9Y6A9 102 aa13.46□□□□□ -0.25
UBQLN4-201ENST00000368309 K7EQG2 157 aa13.46□□□□□ -0.26
UBQLN4-201ENST00000368309 RPL39P62891 51 aaKnown RBP13.46□□□□□ -0.26
UBQLN4-201ENST00000368309 POM121L12Q8N7R1 296 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 OR11H12B2RN74 326 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 HOXD3P31249 432 aaPredicted RBP13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 OR11H1Q8NG94 326 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 OR11H2Q8NH07 326 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 VPREB3Q9UKI3 123 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 TP53TG1Q9Y2A0 90 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 IGHV3-16A0A0C4DH30 117 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 SAMD13Q5VXD3 122 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 HIST1H4GQ99525 98 aa13.45□□□□□ -0.26
UBQLN4-201ENST00000368309 KRTAP10-9P60411 292 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 TM2D2Q9BX73 214 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 HOXA3O43365 443 aaPredicted RBP13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 CDKN1BP46527 198 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 PCP4P48539 62 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 POLR2KP53803 58 aaKnown RBP13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 DEFB136Q30KP8 78 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 CYSLTR1Q9Y271 337 aa13.44□□□□□ -0.26
UBQLN4-201ENST00000368309 SDHAF1A6NFY7 115 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 COX6B1P14854 86 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 ZFP2Q6ZN57 461 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 ZNF256Q9Y2P7 627 aaPredicted RBP13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 TSHBP01222 138 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 LGALS1P09382 135 aaKnown RBP13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 FABP2P12104 132 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 HTN1P15515 57 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 C18orf65Q6ZTR6 163 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 CRYGDP07320 174 aa13.43□□□□□ -0.26
UBQLN4-201ENST00000368309 BBC3Q96PG8 261 aaPredicted RBP13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 ZNF702PQ9H963 129 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 SONP18583 2426 aaKnown RBP13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 J3QLI3 93 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 SAP30O75446 220 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 HIST2H2BDQ6DRA6 164 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 PHLDA1Q8WV24 401 aaPredicted RBP13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 KIR2DL4Q99706 377 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 CUBNO60494 3623 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 MYMXA0A1B0GTQ4 84 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 VCYO14598 125 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 ZNF56Q15929 161 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 PRADC1Q9BSG0 188 aa13.42□□□□□ -0.26
UBQLN4-201ENST00000368309 CD300EQ496F6 205 aaPredicted RBP13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 Q6YL49 198 aa13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 TMEM89A2RUT3 159 aa13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 C9orf85Q96MD7 179 aa13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 IGHV1OR15-1A0A075B7D0 117 aa13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 VPS25Q9BRG1 176 aa13.41□□□□□ -0.26
UBQLN4-201ENST00000368309 TCTEX1D4Q5JR98 221 aa13.4□□□□□ -0.26
UBQLN4-201ENST00000368309 IGHV4-31P0DP07 118 aa13.4□□□□□ -0.26
UBQLN4-201ENST00000368309 SLURP1P55000 103 aa13.4□□□□□ -0.26
UBQLN4-201ENST00000368309 KLHL30-AS1Q8NEE0 82 aa13.4□□□□□ -0.26
UBQLN4-201ENST00000368309 IGIPA6NJ69 53 aa13.4□□□□□ -0.27
UBQLN4-201ENST00000368309 ELANEP08246 267 aa13.4□□□□□ -0.27
UBQLN4-201ENST00000368309 DUX3Q96PT4 197 aa13.4□□□□□ -0.27
UBQLN4-201ENST00000368309 EPG5Q9HCE0 2579 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 KNCNA6PVL3 124 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 UBE2E2Q96LR5 201 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 C11orf86A6NJI1 115 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 SCGB2A2Q13296 93 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 ZNF876PQ49A33 203 aa13.39□□□□□ -0.27
UBQLN4-201ENST00000368309 PRM2P04554 102 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 ODF3Q96PU9 254 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 E9PLD3 99 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 C12orf74Q32Q52 190 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 MORN3Q6PF18 240 aaPredicted RBP13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 LGALS9O00182 355 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 SYT8Q8NBV8 401 aa13.38□□□□□ -0.27
UBQLN4-201ENST00000368309 ZNF815PA8K554 130 aa13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 M0QY20 66 aa13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 OPRPNQ99935 248 aaPredicted RBP13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 ZNF469Q96JG9 3925 aaPredicted RBP13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 UBR5O95071 2799 aaPredicted RBP13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 IGLV4-69A0A075B6H9 119 aa13.37□□□□□ -0.27
UBQLN4-201ENST00000368309 TRBV7-3A0A075B6L6 115 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 K7ERU9 68 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 RPL32P62910 135 aaKnown RBP13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 AMTNQ6UX39 209 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 TRBV27A0A0K0K1C4 114 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 TAL2Q16559 108 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 SCGB1D4Q6XE38 83 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 PLEKHB2Q96CS7 222 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 IGLL5B9A064 214 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 RBMY1A1P0DJD3 496 aaKnown RBP13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 RBMY1CP0DJD4 496 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 DEFB131AP59861 70 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 PMVKQ15126 192 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 RBMY1FQ15415 496 aaKnown RBP13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 OR5A1Q8NGJ0 315 aa13.36□□□□□ -0.27
UBQLN4-201ENST00000368309 IGHV3-73A0A0B4J1V6 119 aa13.35□□□□□ -0.27
UBQLN4-201ENST00000368309 FSHBP01225 129 aa13.35□□□□□ -0.27
UBQLN4-201ENST00000368309 FOXI2Q6ZQN5 318 aa13.35□□□□□ -0.27
UBQLN4-201ENST00000368309 KHDC1LQ5JSQ8 128 aa13.35□□□□□ -0.27
UBQLN4-201ENST00000368309 SETD2Q9BYW2 2564 aaPredicted RBP13.34□□□□□ -0.27
UBQLN4-201ENST00000368309 CCDC168Q8NDH2 2452 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms