RNA–Protein interactions for RNA: ENST00000367251.7

SYNE1-205, Transcript of spectrin repeat containing nuclear envelope protein 1, humanhuman

TSL 1 (best)

Gene SYNE1, Length 5,837 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE1-205ENST00000367251 NUPR1O60356 82 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 MORN5Q5VZ52 161 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 Q6ZVH6 145 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 C14orf132Q9NPU4 83 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 SPANXCQ9NY87 97 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 MRPL36Q9P0J6 103 aaKnown RBP7□□□□□ -1.29
SYNE1-205ENST00000367251 FGF6P10767 208 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 DAZAP2Q15038 168 aaPredicted RBP7□□□□□ -1.29
SYNE1-205ENST00000367251 MAJINQ3KP22 176 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 IGKV2-24A0A0C4DH68 120 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 HERV-K104P63124 156 aa7□□□□□ -1.29
SYNE1-205ENST00000367251 ALPK3Q96L96 1907 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 IFITM1P13164 125 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 RITA1Q96K30 269 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 NUP210LQ5VU65 1888 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 DEFB135Q30KP9 77 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 Q8N9W7 124 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 KIR2DL5BQ8NHK3 375 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 TINCRA0A1B0GVN0 87 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 CASC2Q6XLA1 102 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 U3KQE9 123 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 SORL1Q92673 2214 aa6.99□□□□□ -1.29
SYNE1-205ENST00000367251 YLPM1P49750 1951 aaKnown RBP6.98□□□□□ -1.29
SYNE1-205ENST00000367251 C5orf56Q8N8D9 126 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 UBE2D4Q9Y2X8 147 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 DEFB4AO15263 64 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 SPATA12Q7Z6I5 190 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 C10orf142B7Z368 130 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 UBE2D1P51668 147 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 A0A1W2PNU3 283 aaPredicted RBP6.98□□□□□ -1.29
SYNE1-205ENST00000367251 GAGE12HA6NDE8 117 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 C5orf38Q86SI9 138 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 APRG1Q8IVJ8 170 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 ATP6V0E2Q8NHE4 81 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 A0A1B0GXF2 115 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 TRACP01848 142 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 CFC1BP0CG36 223 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 CFC1P0CG37 223 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 ETDBQ3ZM63 59 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 B9D2Q9BPU9 175 aa6.98□□□□□ -1.29
SYNE1-205ENST00000367251 GNRH2O43555 120 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 C14orf177Q52M58 125 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 TOMM6Q96B49 74 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 Q6ZPA2 131 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 ZNF295-AS1Q8N0V1 137 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 OTOGLQ3ZCN5 2332 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 ZFHX2Q9C0A1 2572 aaPredicted RBP6.97□□□□□ -1.29
SYNE1-205ENST00000367251 H0Y9J4 135 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 ACYP1P07311 99 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 NRGNQ92686 78 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 NCKAP5O14513 1909 aa6.97□□□□□ -1.29
SYNE1-205ENST00000367251 ASPHD1Q5U4P2 390 aa6.96□□□□□ -1.29
SYNE1-205ENST00000367251 C11orf45Q8TAV5 145 aa6.96□□□□□ -1.29
SYNE1-205ENST00000367251 IGKV1D-37A0A075B6S9 117 aa6.96□□□□□ -1.29
SYNE1-205ENST00000367251 MP68P56378 58 aa6.96□□□□□ -1.29
SYNE1-205ENST00000367251 C7orf33Q8WU49 177 aa6.96□□□□□ -1.29
SYNE1-205ENST00000367251 SLURP1P55000 103 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 RNASE13Q5GAN3 156 aaKnown RBP6.96□□□□□ -1.3
SYNE1-205ENST00000367251 ZFP2Q6ZN57 461 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 PCP2Q8IVA1 136 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 Q8N7P7 452 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 BRWD1-AS2P59051 145 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 AMTNQ6UX39 209 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 YPEL4Q96NS1 127 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 SIRPDQ9H106 197 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 TRAV4A0A0B4J268 109 aa6.96□□□□□ -1.3
SYNE1-205ENST00000367251 LY6G6CO95867 125 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 C10orf105Q8TEF2 133 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 H3BMG7 143 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 WFDC9Q8NEX5 89 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 K7ERJ3 54 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 COX7A2LO14548 114 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 CSPG4Q6UVK1 2322 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 IGHV4-30-2A0A087WSY4 118 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 ODF3BA8MYP8 253 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 IGLV2-8P01709 118 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 ANKRD39Q53RE8 183 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 CARD19Q96LW7 228 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 CUL9Q8IWT3 2517 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 CCL25O15444 150 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 ADORA2A-AS1P86434 159 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 C16orf74Q96GX8 76 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 AJUBAQ96IF1 538 aa6.95□□□□□ -1.3
SYNE1-205ENST00000367251 A0A1B0GX51 115 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 NDUFA1O15239 70 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 PLA2G5P39877 138 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 MSMPQ1L6U9 139 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 SLC25A29Q8N8R3 303 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 GRNP28799 593 aaKnown RBP6.94□□□□□ -1.3
SYNE1-205ENST00000367251 DAZ2Q13117 558 aaKnown RBP6.94□□□□□ -1.3
SYNE1-205ENST00000367251 ODF1Q14990 250 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 DAZ4Q86SG3 579 aaKnown RBP6.94□□□□□ -1.3
SYNE1-205ENST00000367251 DAZ3Q9NR90 486 aaKnown RBP6.94□□□□□ -1.3
SYNE1-205ENST00000367251 A0A096LNI7 61 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 E9PLD3 99 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 IGKV4-1P06312 121 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 ADAMTS9Q9P2N4 1935 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 C11orf86A6NJI1 115 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 IGHG2P01859 326 aa6.94□□□□□ -1.3
SYNE1-205ENST00000367251 LINC00173Q6ZV60 143 aa6.94□□□□□ -1.3
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms