RNA–Protein interactions for RNA: ENST00000366764.6

CDC42BPA-202, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 1 (best) BASIC

Gene CDC42BPA, Length 10,445 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-202ENST00000366764 FRMD6-AS1P0C7T7 363 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 SAP30O75446 220 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 ANKRD29Q8N6D5 301 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 C9orf153Q5TBE3 101 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 TMEM89A2RUT3 159 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 MRPL36Q9P0J6 103 aaKnown RBP9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 E7EUB6 86 aa9.14□□□□□ -0.95
CDC42BPA-202ENST00000366764 LY6DQ14210 128 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 GDF5OSQ5U4N7 250 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 C11orf86A6NJI1 115 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 RUSC1-AS1Q66K80 236 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 KLK9Q9UKQ9 250 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 TP53TG3Q9ULZ0 132 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 ZFP2Q6ZN57 461 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 A0A1W2PRX2 142 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 WT1P19544 449 aaPredicted RBP9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 LAMTOR3Q9UHA4 124 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 RNF114Q9Y508 228 aa9.13□□□□□ -0.95
CDC42BPA-202ENST00000366764 IGLC6P0CF74 106 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 GAGE5Q13069 117 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 GAGE6Q13070 117 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 Q8N9W7 124 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 BAALCQ8WXS3 180 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 H3BT86 120 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 NBL1P41271 181 aa9.12□□□□□ -0.95
CDC42BPA-202ENST00000366764 RPL39LQ96EH5 51 aaKnown RBP9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 MSRB1Q9NZV6 116 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 FANCD2OSQ96PS1 177 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 MSMPQ1L6U9 139 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 VPREB3Q9UKI3 123 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 ODF3Q96PU9 254 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 COL4A2P08572 1712 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 GATA1P15976 413 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 DAZAP2Q15038 168 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 GPHB5Q86YW7 130 aa9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 A0A1W2PNU3 283 aaPredicted RBP9.11□□□□□ -0.95
CDC42BPA-202ENST00000366764 POLQO75417 2590 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 FOXI1Q12951 378 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 SUMO4Q6EEV6 95 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 SLC25A29Q8N8R3 303 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 UBL5Q9BZL1 73 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 CRYGBP07316 175 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 FASNP49327 2511 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 ODF3BA8MYP8 253 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 H3BQ85 93 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 HIST1H4AP62805 103 aaKnown RBP9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 GNRH2O43555 120 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 GNLYP22749 145 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 EDA2RQ9HAV5 297 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 ACANP16112 2415 aa9.1□□□□□ -0.95
CDC42BPA-202ENST00000366764 CRYBA4P53673 196 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 DAZ2Q13117 558 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 Q71RC1 249 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 DAZ4Q86SG3 579 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 C15orf53Q8NAA6 179 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 DAZ3Q9NR90 486 aaKnown RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 HOXD3P31249 432 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 H0YGX0 51 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 TRAV12-2A0A075B6T6 113 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 ICOSQ9Y6W8 199 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 A4D1N5 150 aa9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 LINC00322Q6ZN03 302 aaPredicted RBP9.09□□□□□ -0.95
CDC42BPA-202ENST00000366764 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 WFDC2Q14508 124 aa9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 VWC2LB2RUY7 222 aa9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 SH2D6Q7Z4S9 175 aa9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 CNFNQ9BYD5 112 aa9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 ZNF462Q96JM2 2506 aa9.08□□□□□ -0.96
CDC42BPA-202ENST00000366764 ATP5G1P05496 136 aa9.07□□□□□ -0.96
CDC42BPA-202ENST00000366764 XCL2Q9UBD3 114 aa9.07□□□□□ -0.96
CDC42BPA-202ENST00000366764 Q8N7P7 452 aa9.07□□□□□ -0.96
CDC42BPA-202ENST00000366764 ZNRF2Q8NHG8 242 aa9.07□□□□□ -0.96
CDC42BPA-202ENST00000366764 NDUFA11Q86Y39 141 aa9.07□□□□□ -0.96
CDC42BPA-202ENST00000366764 IGLV2-11P01706 119 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 LINC01620Q4KN68 170 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 Q9H8V8 135 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 SRCAPQ6ZRS2 3230 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 UBE2E2Q96LR5 201 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 IGHG2P01859 326 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 KNCNA6PVL3 124 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 EBI3Q14213 229 aa9.06□□□□□ -0.96
CDC42BPA-202ENST00000366764 PRAC2D3DTV9 90 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 RBX1P62877 108 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 IGHV3-53P01767 116 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 CENPEQ02224 2701 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 DEFB104AQ8WTQ1 72 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 TMEM126AQ9H061 195 aa9.05□□□□□ -0.96
CDC42BPA-202ENST00000366764 HTN3P15516 51 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 ZNF625Q96I27 306 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 SPAG8Q99932 426 aaPredicted RBP9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 MDFICQ9P1T7 246 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 RPL35AP18077 110 aaKnown RBP9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 F8P00451 2351 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 A0A0B4J2C4 111 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 C11orf44Q8N8P7 122 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 TRACP01848 142 aa9.04□□□□□ -0.96
CDC42BPA-202ENST00000366764 TRBV10-2A0A0K0K1G8 114 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 ATOX1O00244 68 aa9.03□□□□□ -0.96
CDC42BPA-202ENST00000366764 BAALC-AS2P0C853 105 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 101.6 ms