RNA–Protein interactions for RNA: ENST00000361575.3

RPL39-201, Transcript of ribosomal protein L39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPL39, Length 401 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPL39-201ENST00000361575 A0A087WTM6 91 aa0.89□□□□□ -2.27
RPL39-201ENST00000361575 APOC1P02654 83 aa0.89□□□□□ -2.27
RPL39-201ENST00000361575 FAM103A1Q9BTL3 118 aaKnown RBP0.89□□□□□ -2.27
RPL39-201ENST00000361575 TMEM191AQ9H0A3 160 aa0.89□□□□□ -2.27
RPL39-201ENST00000361575 TMEM2Q9UHN6 1383 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 TRAV12-3A0A0B4J271 114 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 TCRBV3S1A0A5B6 114 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 RRAS2P62070 204 aaPredicted RBP0.88□□□□□ -2.27
RPL39-201ENST00000361575 SPANXN1Q5VSR9 72 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 SCIMPQ6UWF3 145 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 PSMG3Q9BT73 122 aaPredicted RBP0.88□□□□□ -2.27
RPL39-201ENST00000361575 MYOM3Q5VTT5 1437 aa0.88□□□□□ -2.27
RPL39-201ENST00000361575 MYH7P12883 1935 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 GRIN2AQ12879 1464 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 K7EP13 123 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 SLC48A1Q6P1K1 146 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 TMEM242Q9NWH2 141 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 SPEF2Q9C093 1822 aa0.87□□□□□ -2.27
RPL39-201ENST00000361575 NRXN2Q9P2S2 1712 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 JMJD1CQ15652 2540 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 RBBP6Q7Z6E9 1792 aaKnown RBP0.86□□□□□ -2.27
RPL39-201ENST00000361575 CCL3L1P16619 93 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 GUCA1AP43080 201 aaPredicted RBP0.86□□□□□ -2.27
RPL39-201ENST00000361575 FXYD6P3P58550 94 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 UBE2G1P62253 170 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 C9orf116Q5BN46 136 aaPredicted RBP0.86□□□□□ -2.27
RPL39-201ENST00000361575 CYP2G1PQ6ZSU1 146 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 C10orf82Q8WW14 230 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 LINC00470Q9BZP3 86 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 BET1LQ9NYM9 111 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 ARFGEF1Q9Y6D6 1849 aa0.86□□□□□ -2.27
RPL39-201ENST00000361575 PARP14Q460N5 1801 aa0.85□□□□□ -2.27
RPL39-201ENST00000361575 TRAV12-2A0A075B6T6 113 aa0.85□□□□□ -2.27
RPL39-201ENST00000361575 GNG7O60262 68 aa0.85□□□□□ -2.27
RPL39-201ENST00000361575 IL5P05113 134 aa0.85□□□□□ -2.27
RPL39-201ENST00000361575 KCNRGQ8N5I3 272 aa0.85□□□□□ -2.27
RPL39-201ENST00000361575 IBTKQ9P2D0 1353 aaPredicted RBP0.84□□□□□ -2.27
RPL39-201ENST00000361575 SELENOWP63302 87 aa0.84□□□□□ -2.27
RPL39-201ENST00000361575 KRTAP5-10Q6L8G5 202 aa0.84□□□□□ -2.27
RPL39-201ENST00000361575 C20orf197Q8N268 126 aa0.84□□□□□ -2.27
RPL39-201ENST00000361575 TSC22D3Q99576 134 aa0.84□□□□□ -2.27
RPL39-201ENST00000361575 COA4Q9NYJ1 87 aa0.84□□□□□ -2.27
RPL39-201ENST00000361575 SPATA8Q6RVD6 105 aa0.83□□□□□ -2.28
RPL39-201ENST00000361575 ARL11Q969Q4 196 aa0.83□□□□□ -2.28
RPL39-201ENST00000361575 NAV3Q8IVL0 2385 aa0.82□□□□□ -2.28
RPL39-201ENST00000361575 CLPSL1A2RUU4 121 aa0.82□□□□□ -2.28
RPL39-201ENST00000361575 HIST1H1DP16402 221 aaKnown RBP0.82□□□□□ -2.28
RPL39-201ENST00000361575 DSCR8Q96T75 97 aa0.82□□□□□ -2.28
RPL39-201ENST00000361575 CCDC167Q9P0B6 97 aa0.82□□□□□ -2.28
RPL39-201ENST00000361575 COX7B2Q8TF08 81 aa0.81□□□□□ -2.28
RPL39-201ENST00000361575 SPTSSAQ969W0 71 aa0.81□□□□□ -2.28
RPL39-201ENST00000361575 TNS1Q9HBL0 1735 aaKnown RBP0.81□□□□□ -2.28
RPL39-201ENST00000361575 DOCK11Q5JSL3 2073 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 NDUFB6O95139 128 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 S100A7L2Q5SY68 101 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 C4orf33Q8N1A6 199 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 PPP1R1CQ8WVI7 109 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 Q96NJ1 140 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 SEC11CQ9BY50 192 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 RPRMQ9NS64 109 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 BDP1A6H8Y1 2624 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 TENM3Q9P273 2699 aa0.8□□□□□ -2.28
RPL39-201ENST00000361575 RBAKDNA6NC62 111 aa0.79□□□□□ -2.28
RPL39-201ENST00000361575 PIPP12273 146 aaPredicted RBP0.79□□□□□ -2.28
RPL39-201ENST00000361575 UBE2D1P51668 147 aa0.79□□□□□ -2.28
RPL39-201ENST00000361575 SPINK7P58062 85 aa0.79□□□□□ -2.28
RPL39-201ENST00000361575 SSBP1Q04837 148 aaKnown RBP0.79□□□□□ -2.28
RPL39-201ENST00000361575 LSM10Q969L4 123 aaKnown RBP0.79□□□□□ -2.28
RPL39-201ENST00000361575 LOC100130705A0A1B0GUX0 176 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 SNCGO76070 127 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 CBLN1P23435 193 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 SARNPP82979 210 aaKnown RBP0.78□□□□□ -2.28
RPL39-201ENST00000361575 PDCD10Q9BUL8 212 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 AGPAT4-IT1Q9H0P7 198 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 MBD5Q9P267 1494 aa0.78□□□□□ -2.28
RPL39-201ENST00000361575 KRTAP2-3P0C7H8 128 aa0.77□□□□□ -2.29
RPL39-201ENST00000361575 RPL7L1Q6DKI1 246 aaKnown RBP0.77□□□□□ -2.29
RPL39-201ENST00000361575 SPTSSBQ8NFR3 76 aa0.77□□□□□ -2.29
RPL39-201ENST00000361575 KRTAP2-4Q9BYR9 128 aa0.77□□□□□ -2.29
RPL39-201ENST00000361575 KRTAP2-1Q9BYU5 128 aa0.77□□□□□ -2.29
RPL39-201ENST00000361575 DAPK1P53355 1430 aa0.77□□□□□ -2.29
RPL39-201ENST00000361575 FAM92AA1XBS5 289 aa0.76□□□□□ -2.29
RPL39-201ENST00000361575 PRH1P02810 166 aa0.76□□□□□ -2.29
RPL39-201ENST00000361575 MEIG1Q5JSS6 88 aa0.76□□□□□ -2.29
RPL39-201ENST00000361575 MYO7AQ13402 2215 aa0.76□□□□□ -2.29
RPL39-201ENST00000361575 SSC5DA1L4H1 1573 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 ZNF518AQ6AHZ1 1483 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 GVQW2A0A096LPI5 108 aaPredicted RBP0.75□□□□□ -2.29
RPL39-201ENST00000361575 A6NIN4 97 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 FAM25AB3EWG3 89 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 FAM25CB3EWG5 89 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 FAM25GB3EWG6 89 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 SNRNP25Q9BV90 132 aaKnown RBP0.75□□□□□ -2.29
RPL39-201ENST00000361575 CACNA1HO95180 2353 aa0.75□□□□□ -2.29
RPL39-201ENST00000361575 MCRIP1C9JLW8 97 aa0.74□□□□□ -2.29
RPL39-201ENST00000361575 V9GYV3 84 aa0.74□□□□□ -2.29
RPL39-201ENST00000361575 CFTRP13569 1480 aa0.73□□□□□ -2.29
RPL39-201ENST00000361575 SIPA1L3O60292 1781 aaPredicted RBP0.73□□□□□ -2.29
RPL39-201ENST00000361575 TRBV7-1A0A0A6YYK4 115 aa0.73□□□□□ -2.29
RPL39-201ENST00000361575 RERGLQ9H628 205 aa0.73□□□□□ -2.29
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms