RNA–Protein interactions for RNA: ENST00000360565.7

SCAF1-201, Transcript of SR-related CTD associated factor 1, humanhuman

APPRIS P2 TSL 2 BASIC

Gene SCAF1, Length 4,306 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF1-201ENST00000360565 LGALS1P09382 135 aaKnown RBP12.55□□□□□ -0.4
SCAF1-201ENST00000360565 ZFYVE26Q68DK2 2539 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 K7EMI3 77 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 AZU1P20160 251 aa12.55□□□□□ -0.4
SCAF1-201ENST00000360565 IGHG2P01859 326 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 TMEM86BQ8N661 226 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 JMJD1CQ15652 2540 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 LY6LH3BQJ8 138 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 TRAV8-3A0A0A6YYJ7 113 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 C6orf226Q5I0X4 101 aa12.54□□□□□ -0.4
SCAF1-201ENST00000360565 LRRK2Q5S007 2527 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 SUMO4Q6EEV6 95 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 TAX1BP3O14907 124 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 CRPP02741 224 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 TP73-AS1Q9UF72 201 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 GAGE7O76087 117 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 GAGE12FP0CL80 117 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 GAGE12GP0CL81 117 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 GAGE12IP0CL82 117 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 FXYD2P54710 66 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 PRO1854Q9UHT4 67 aa12.53□□□□□ -0.4
SCAF1-201ENST00000360565 CRIP1P50238 77 aa12.52□□□□□ -0.4
SCAF1-201ENST00000360565 SLURP1P55000 103 aa12.52□□□□□ -0.4
SCAF1-201ENST00000360565 PRB1P04280 392 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 GAGE2BQ13066 116 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 GAGE2EQ4V326 116 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 BOD1L2Q8IYS8 172 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 GAGE2DQ9UEU5 116 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 TRBV20-1A0A075B6N2 111 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 VWC2LB2RUY7 222 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 F8W1H4 67 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 CKS1BP61024 79 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 TSSC4Q9Y5U2 329 aaPredicted RBP12.52□□□□□ -0.41
SCAF1-201ENST00000360565 A0A0C4DFX4 3053 aa12.52□□□□□ -0.41
SCAF1-201ENST00000360565 ODF1Q14990 250 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 RNF114Q9Y508 228 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 LAMA3Q16787 3333 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 FGF6P10767 208 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 FSTL3O95633 263 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 SRSF2Q01130 221 aaKnown RBP12.51□□□□□ -0.41
SCAF1-201ENST00000360565 ANAPC13Q9BS18 74 aa12.51□□□□□ -0.41
SCAF1-201ENST00000360565 BPTFQ12830 3046 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 RPL39P62891 51 aaKnown RBP12.5□□□□□ -0.41
SCAF1-201ENST00000360565 ZFP2Q6ZN57 461 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 SPATA12Q7Z6I5 190 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 GATD1Q8NB37 220 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 C19orf84I3L1E1 186 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 RHOHQ15669 191 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 APRG1Q8IVJ8 170 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 RNASE8Q8TDE3 154 aaKnown RBP12.5□□□□□ -0.41
SCAF1-201ENST00000360565 CHD9Q3L8U1 2897 aa12.5□□□□□ -0.41
SCAF1-201ENST00000360565 IGLC6P0CF74 106 aa12.49□□□□□ -0.41
SCAF1-201ENST00000360565 Q8N1Y9 231 aa12.49□□□□□ -0.41
SCAF1-201ENST00000360565 JPT2Q9H910 190 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 LEPROTO15243 131 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 IGLV2-11P01706 119 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 IGHV4OR15-8A0A075B7B6 117 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 A0A087WW49 117 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 A0A0J9YXV3 536 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 FN1P02751 2386 aaKnown RBP12.48□□□□□ -0.41
SCAF1-201ENST00000360565 SPINK8P0C7L1 97 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 U3KQE9 123 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 K7EMT4 169 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 EBI3Q14213 229 aa12.48□□□□□ -0.41
SCAF1-201ENST00000360565 IGKV2D-29A0A075B6S2 120 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-201ENST00000360565 IGKV2-29A2NJV5 120 aaPredicted RBP12.47□□□□□ -0.41
SCAF1-201ENST00000360565 ZFAND6Q6FIF0 208 aa12.47□□□□□ -0.41
SCAF1-201ENST00000360565 GPHB5Q86YW7 130 aa12.47□□□□□ -0.41
SCAF1-201ENST00000360565 IGLL5B9A064 214 aa12.46□□□□□ -0.41
SCAF1-201ENST00000360565 LINC00310P59036 64 aa12.46□□□□□ -0.41
SCAF1-201ENST00000360565 TMEM243Q9BU79 118 aa12.46□□□□□ -0.41
SCAF1-201ENST00000360565 A6NDX4 124 aa12.46□□□□□ -0.42
SCAF1-201ENST00000360565 IGF1P05019 195 aa12.46□□□□□ -0.42
SCAF1-201ENST00000360565 GAGE6Q13070 117 aa12.46□□□□□ -0.42
SCAF1-201ENST00000360565 PPDPFLQ8WWR9 84 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 PKD1L2Q7Z442 2459 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 S100A7L2Q5SY68 101 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 C11orf71Q6IPW1 123 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 ZFAND3Q9H8U3 227 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 SMAD5-AS1Q9Y6J3 95 aa12.45□□□□□ -0.42
SCAF1-201ENST00000360565 SH2D6Q7Z4S9 175 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 MDFICQ9P1T7 246 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 MTORP42345 2549 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 TEX48A0A1B0GUV7 120 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 PFN2P35080 140 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 BAALCQ8WXS3 180 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 HIGD1BQ9P298 99 aa12.44□□□□□ -0.42
SCAF1-201ENST00000360565 CDSNQ15517 529 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 CCL24O00175 119 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 TNFRSF13BO14836 293 aaPredicted RBP12.43□□□□□ -0.42
SCAF1-201ENST00000360565 POLQO75417 2590 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 TRAV12-1A0A0B4J245 112 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 DEFB113Q30KQ7 82 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 TOMM6Q96B49 74 aa12.43□□□□□ -0.42
SCAF1-201ENST00000360565 NOP10Q9NPE3 64 aaKnown RBP12.43□□□□□ -0.42
SCAF1-201ENST00000360565 PRRC2AP48634 2157 aaKnown RBP12.42□□□□□ -0.42
SCAF1-201ENST00000360565 SS18Q15532 418 aa12.42□□□□□ -0.42
SCAF1-201ENST00000360565 C11orf86A6NJI1 115 aa12.42□□□□□ -0.42
SCAF1-201ENST00000360565 SLC25A20O43772 301 aa12.42□□□□□ -0.42
SCAF1-201ENST00000360565 GAGE12HA6NDE8 117 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms