RNA–Protein interactions for RNA: ENST00000360515.7

CDC42SE2-201, Transcript of CDC42 small effector 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE2, Length 3,591 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE2-201ENST00000360515 B4DEV8 164 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 C9JCJ5 164 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 FUSP35637 526 aaKnown RBP eCLIP3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 CAMLGP49069 296 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 PPP1R1AQ13522 171 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 NIT1Q86X76 327 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 TMEM242Q9NWH2 141 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 LENEPQ9Y5L5 61 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 CRYM-AS1A6NIL9 109 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 OR7C2O60412 319 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 Q6AWC8 147 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 ATP6V0E2Q8NHE4 81 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 FUT9Q9Y231 359 aa3.82□□□□□ -1.8
CDC42SE2-201ENST00000360515 TRAV18A0A075B6X5 111 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 C7orf71A4D174 169 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 RBAKDNA6NC62 111 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 E5RGE8 158 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 FXYD4P59646 89 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 ZNF90Q03938 601 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 LINC00477Q96M19 166 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 SLC25A39Q9BZJ4 359 aaPredicted RBP3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 TMEM14CQ9P0S9 112 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 TRBV6-4A0A1B0GX49 114 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 GAGE12BA1L429 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 RBFOX3A6NFN3 312 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 PMS2P5A8MQ11 134 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 GAGE7O76087 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 PRM2P04554 102 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 SRP19P09132 144 aaKnown RBP3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 GAGE12FP0CL80 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 GAGE12GP0CL81 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 GAGE12IP0CL82 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 HINT1P49773 126 aaPredicted RBP3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 C9orf163Q8N9P6 203 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 RMI2Q96E14 147 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 UHRF2Q96PU4 802 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 UQCR10Q9UDW1 63 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 IGHV3-38A0A0C4DH36 116 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 A0A0J9YY99 117 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 A0A1B0GV50 99 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 PFN1P07737 140 aaKnown RBP3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 PRSS3P35030 304 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 RAB11AP62491 216 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 PDE6HQ13956 83 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 SPINK6Q6UWN8 80 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 OR8I2Q8N0Y5 310 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 RSG1Q9BU20 258 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 CRCT1Q9UGL9 99 aa3.81□□□□□ -1.8
CDC42SE2-201ENST00000360515 MUC2Q02817 5179 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 SRIP30626 198 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 TAS2R30P59541 319 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 CKS1BP61024 79 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 ZNF266Q14584 549 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 Q6ZN92 141 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 TMEM229BQ8NBD8 167 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 BLNKQ8WV28 456 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 SFRP2Q96HF1 295 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 IMMP2LQ96T52 175 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 RTBDNQ9BSG5 229 aaPredicted RBP3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 STRAPQ9Y3F4 350 aaKnown RBP3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 STAG3L2P0CL84 134 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 CYB561D1Q8N8Q1 229 aa3.8□□□□□ -1.8
CDC42SE2-201ENST00000360515 CTRLP40313 264 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 HERV-K104P63124 156 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 RAB31Q13636 194 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 RAB32Q13637 225 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 TMEM182Q6ZP80 229 aaPredicted RBP3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 ERASQ7Z444 233 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 LGI3Q8N145 548 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 NAA60Q9H7X0 242 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 IGKV3-20P01619 116 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 OR10J4P0C629 311 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 PET100P0DJ07 73 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 IGLC3P0DOY3 106 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 CST9LP1Q5W188 147 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 KRTAP26-1Q6PEX3 210 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 DPPA3Q6W0C5 159 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 SDIM1Q6ZPB5 146 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 ZFAND2AQ8N6M9 145 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 FER1L6-AS1Q8NA97 138 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 SMIM3Q9BZL3 60 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 TRAV12-2A0A075B6T6 113 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 TRAV34A0A0B4J273 112 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 NUPR1O60356 82 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 HYPMO75409 117 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 ESDP10768 282 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 GYPEP15421 78 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 RPL12P30050 165 aaKnown RBP3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 SRPXP78539 464 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 CCL20P78556 96 aa3.79□□□□□ -1.8
CDC42SE2-201ENST00000360515 TRAV8-6A0A0B4J262 113 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 PIGPP57054 158 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 SMAGPQ0VAQ4 97 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 PNRC1Q12796 327 aaPredicted RBP3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 SPATA45Q537H7 98 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 CTDSP1Q9GZU7 261 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 GPR132Q9UNW8 380 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 MAP1LC3B2A6NCE7 125 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 H0Y8G0 127 aa3.78□□□□□ -1.8
CDC42SE2-201ENST00000360515 SUMO1P63165 101 aaKnown RBP3.78□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 90.1 ms