RNA–Protein interactions for RNA: ENST00000358730.6

RFX3-202, Transcript of regulatory factor X3, humanhuman

TSL 1 (best) BASIC

Gene RFX3, Length 2,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-202ENST00000358730 IGSF10Q6WRI0 2623 aa6.4□□□□□ -1.38
RFX3-202ENST00000358730 SDHAF1A6NFY7 115 aa6.4□□□□□ -1.38
RFX3-202ENST00000358730 CRYGDP07320 174 aa6.4□□□□□ -1.38
RFX3-202ENST00000358730 RPL39P62891 51 aaKnown RBP6.4□□□□□ -1.38
RFX3-202ENST00000358730 RPL32P62910 135 aaKnown RBP6.4□□□□□ -1.38
RFX3-202ENST00000358730 COTL1Q14019 142 aa6.4□□□□□ -1.38
RFX3-202ENST00000358730 SCGB1D4Q6XE38 83 aa6.4□□□□□ -1.38
RFX3-202ENST00000358730 A0A0J9YX75 114 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 LINC01619G3V211 115 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 G3V4G9 280 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 VCYO14598 125 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 TSHBP01222 138 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 POLR2KP53803 58 aaKnown RBP6.4□□□□□ -1.39
RFX3-202ENST00000358730 RIPPLY3P57055 190 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 ZNF56Q15929 161 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 CD300EQ496F6 205 aaPredicted RBP6.4□□□□□ -1.39
RFX3-202ENST00000358730 MDFICQ9P1T7 246 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 SORL1Q92673 2214 aa6.4□□□□□ -1.39
RFX3-202ENST00000358730 IGLV4-69A0A075B6H9 119 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 IGHV3-16A0A0C4DH30 117 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 C11orf86A6NJI1 115 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 SYNJ2BPP57105 145 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 SPINK13Q1W4C9 94 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 ODF3Q96PU9 254 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 ZANQ9Y493 2812 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 IGIPA6NJ69 53 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 RPL24P83731 157 aaKnown RBP6.39□□□□□ -1.39
RFX3-202ENST00000358730 PMVKQ15126 192 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 Q8N1Y9 231 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 LINC01356Q8N9X3 169 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 SYT8Q8NBV8 401 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 C9orf85Q96MD7 179 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 ZNF256Q9Y2P7 627 aaPredicted RBP6.39□□□□□ -1.39
RFX3-202ENST00000358730 LINC01549A6NIU2 74 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 K7EQG2 157 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 LGALS9O00182 355 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 DSCR9P59020 149 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 HERVK_113P61574 105 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 FOXI2Q6ZQN5 318 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 MAPK1IP1LQ8NDC0 245 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 PLEKHB2Q96CS7 222 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 DUX5Q96PT3 197 aa6.39□□□□□ -1.39
RFX3-202ENST00000358730 CACNA1AO00555 2505 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 ACACBO00763 2458 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 COX6B1P14854 86 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 RRN3P1Q2M238 152 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 PAPPA-AS1Q5QFB9 102 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 CREBBPQ92793 2442 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 POLQO75417 2590 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 IGHV1OR15-1A0A075B7D0 117 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 TRBV27A0A0K0K1C4 114 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 TEX48A0A1B0GUV7 120 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 A0A1B0GWB2 263 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 H3BMG7 143 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 KLHL30-AS1Q8NEE0 82 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 TMEM141Q96I45 108 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 TIMM17AQ99595 171 aa6.38□□□□□ -1.39
RFX3-202ENST00000358730 TRBV6-5A0A0K0K1A5 114 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 TMEM89A2RUT3 159 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 TGFAP01135 160 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 SRSF9Q13242 221 aaKnown RBP eCLIP6.37□□□□□ -1.39
RFX3-202ENST00000358730 AMTNQ6UX39 209 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 TMEM238LA0A1B0GVL6 79 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 A6NJY4 79 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 TMEM170BQ5T4T1 132 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 FAM208BQ5VWN6 2430 aa6.37□□□□□ -1.39
RFX3-202ENST00000358730 M0QY20 66 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 HOXD3P31249 432 aaPredicted RBP6.36□□□□□ -1.39
RFX3-202ENST00000358730 MRPL16Q9NX20 251 aaKnown RBP6.36□□□□□ -1.39
RFX3-202ENST00000358730 VPREB3Q9UKI3 123 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 HOXA3O43365 443 aaPredicted RBP6.36□□□□□ -1.39
RFX3-202ENST00000358730 MORN3Q6PF18 240 aaPredicted RBP6.36□□□□□ -1.39
RFX3-202ENST00000358730 TRPT1Q86TN4 253 aaKnown RBP6.36□□□□□ -1.39
RFX3-202ENST00000358730 MTURNQ8N3F0 131 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 PGPEP1Q9NXJ5 209 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 CENPEQ02224 2701 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 F8W1H4 67 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 J3QLI3 93 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 WFDC2Q14508 124 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 ZNF876PQ49A33 203 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 ZNRF2Q8NHG8 242 aa6.36□□□□□ -1.39
RFX3-202ENST00000358730 A0A096LNT2 108 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 TSPEAR-AS2P59090 65 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 NSUN5P1Q3KNT7 163 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 TRGV11A0A075B6L2 103 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 ELANEP08246 267 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 RHOHQ15669 191 aa6.35□□□□□ -1.39
RFX3-202ENST00000358730 A0A0J9YY99 117 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 HTN1P15515 57 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 OPRPNQ99935 248 aaPredicted RBP6.34□□□□□ -1.39
RFX3-202ENST00000358730 ZNF702PQ9H963 129 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 SPANXB1Q9NS25 103 aaPredicted RBP6.34□□□□□ -1.39
RFX3-202ENST00000358730 FBN2P35556 2912 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 APOMO95445 188 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 UBE2D1P51668 147 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 DEFB136Q30KP8 78 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 GAGE13Q4V321 117 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 TCTEX1D4Q5JR98 221 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 LRRK2Q5S007 2527 aa6.34□□□□□ -1.39
RFX3-202ENST00000358730 UBE2E2Q96LR5 201 aa6.34□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms