RNA–Protein interactions for RNA: ENST00000358528.8

CSDE1-203, Transcript of cold shock domain containing E1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CSDE1, Length 4,076 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-203ENST00000358528 SUMO4Q6EEV6 95 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 RELNP78509 3460 aa4.99□□□□□ -1.61
CSDE1-203ENST00000358528 SNCGO76070 127 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 SNRPD3P62318 126 aaKnown RBP4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TCF15Q12870 199 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 IGF2-ASQ6U949 168 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 SIRPDQ9H106 197 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 ZMAT4Q9H898 229 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 CCDC168Q8NDH2 2452 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TRAV26-1A0A087WT03 109 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 MT-ATP8P03928 68 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TTC32Q5I0X7 151 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TEX29Q8N6K0 151 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 C5orf56Q8N8D9 126 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 NEXN-AS1Q8NBZ9 246 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 C1QTNF4Q9BXJ3 329 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 CNFNQ9BYD5 112 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 IGLV2-18A0A075B6J9 118 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TRBV7-3A0A075B6L6 115 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 A4D1N5 150 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TRPT1Q86TN4 253 aaKnown RBP4.98□□□□□ -1.61
CSDE1-203ENST00000358528 ZFAND2AQ8N6M9 145 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 MAPK1IP1LQ8NDC0 245 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 PPDPFLQ8WWR9 84 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 ZNF625Q96I27 306 aaPredicted RBP4.98□□□□□ -1.61
CSDE1-203ENST00000358528 PRO1854Q9UHT4 67 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 CENPEQ02224 2701 aa4.98□□□□□ -1.61
CSDE1-203ENST00000358528 TRAV12-1A0A0B4J245 112 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 A0A0J9YXV3 536 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 IGHV4-38-2P0DP08 117 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 EDN2P20800 178 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 Q6ZS46 218 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 Q8N6K4 173 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 PHLDA1Q8WV24 401 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-203ENST00000358528 DAZ1Q9NQZ3 744 aaKnown RBP4.97□□□□□ -1.61
CSDE1-203ENST00000358528 TNFRSF18Q9Y5U5 241 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 FAM223BA6NKX1 122 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 TCL1BO95988 128 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 SRSF2Q01130 221 aaKnown RBP4.97□□□□□ -1.61
CSDE1-203ENST00000358528 FAM223AQ8IWN6 122 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 MDFICQ9P1T7 246 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 IGHV3-38A0A0C4DH36 116 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 IGKV3OR2-268A0A0C4DH90 116 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 NDUFA4O00483 81 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 SYNJ2BPP57105 145 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 NTN5Q8WTR8 489 aaPredicted RBP4.97□□□□□ -1.61
CSDE1-203ENST00000358528 AJUBAQ96IF1 538 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 PIMREGQ9BSJ6 248 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 MYO18BQ8IUG5 2567 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 SLC25A20O43772 301 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 COX6CP09669 75 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 ANKRD29Q8N6D5 301 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 DUX3Q96PT4 197 aa4.97□□□□□ -1.61
CSDE1-203ENST00000358528 IGHV1-69DA0A0B4J2H0 117 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV3-16A0A0C4DH30 117 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV1-69P01742 117 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 ZFAND6Q6FIF0 208 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 MORN3Q6PF18 240 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-203ENST00000358528 CEMP1Q6PRD7 247 aaPredicted RBP4.96□□□□□ -1.62
CSDE1-203ENST00000358528 MRPL53Q96EL3 112 aaKnown RBP4.96□□□□□ -1.62
CSDE1-203ENST00000358528 CLUHP3Q96NS8 147 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 TRBV20-1A0A075B6N2 111 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 NDUFA11Q86Y39 141 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 CCL19Q99731 98 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 A0A1W2PPR1 153 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 GAGE2BQ13066 116 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 GAGE2EQ4V326 116 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 MUSTN1Q8IVN3 82 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 GAGE2DQ9UEU5 116 aa4.96□□□□□ -1.62
CSDE1-203ENST00000358528 COL12A1Q99715 3063 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 RNASE3P12724 160 aaKnown RBP4.95□□□□□ -1.62
CSDE1-203ENST00000358528 RPL13AP40429 203 aaKnown RBP4.95□□□□□ -1.62
CSDE1-203ENST00000358528 EBI3Q14213 229 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 PIFOQ8TCI5 191 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 TIMM21Q9BVV7 248 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 IGHV4-61A0A0C4DH41 118 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 A0A0J9YY99 117 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 P0DMU3 169 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 FAM231AP0DMU4 169 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 FAM231CP0DMU5 169 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 COX8CQ7Z4L0 72 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 TEN1Q86WV5 123 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 C10orf126Q8N4M7 172 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 DAND5Q8N907 189 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 LENEPQ9Y5L5 61 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 TRAV8-3A0A0A6YYJ7 113 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 PRM2P04554 102 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 CRYBA4P53673 196 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 LCE2DQ5TA82 110 aaPredicted RBP4.95□□□□□ -1.62
CSDE1-203ENST00000358528 C2orf82Q6UX34 121 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 Q8N1Y9 231 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 USMG5Q96IX5 58 aa4.95□□□□□ -1.62
CSDE1-203ENST00000358528 CFC1BP0CG36 223 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 CFC1P0CG37 223 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 GNLYP22749 145 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 LMO4P61968 165 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 MEIG1Q5JSS6 88 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 C11orf44Q8N8P7 122 aa4.94□□□□□ -1.62
CSDE1-203ENST00000358528 ITLN2Q8WWU7 325 aaPredicted RBP4.94□□□□□ -1.62
CSDE1-203ENST00000358528 TMEM141Q96I45 108 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.3 ms