RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 PLAC8L1A1L4L8 177 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 DNAH3Q8TD57 4116 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 NACAE9PAV3 2078 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 ESDP10768 282 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 PDZD11Q5EBL8 140 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 MRAP2Q96G30 205 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 C16orf74Q96GX8 76 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 SAMD10Q9BYL1 202 aa12.3□□□□□ -0.44
TPM1-205ENST00000357980 A0A087WWL8 130 aa12.29□□□□□ -0.44
TPM1-205ENST00000357980 TRAV26-2A0A0B4J265 109 aa12.29□□□□□ -0.44
TPM1-205ENST00000357980 NPYP01303 97 aa12.29□□□□□ -0.44
TPM1-205ENST00000357980 CRYGDP07320 174 aa12.29□□□□□ -0.44
TPM1-205ENST00000357980 SMIM17P0DL12 118 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 GATA1P15976 413 aaPredicted RBP12.28□□□□□ -0.44
TPM1-205ENST00000357980 RRN3P1Q2M238 152 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 RASL10AQ92737 203 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 URB1-AS1Q96HZ7 61 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 LAMTOR2Q9Y2Q5 125 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 NBEAL2Q6ZNJ1 2754 aa12.28□□□□□ -0.44
TPM1-205ENST00000357980 A8MZ25 164 aa12.27□□□□□ -0.44
TPM1-205ENST00000357980 MGPP08493 103 aa12.27□□□□□ -0.44
TPM1-205ENST00000357980 NRACQ8N912 160 aa12.27□□□□□ -0.44
TPM1-205ENST00000357980 NBEAL1Q6ZS30 2694 aa12.27□□□□□ -0.44
TPM1-205ENST00000357980 NOTCH1P46531 2555 aa12.27□□□□□ -0.44
TPM1-205ENST00000357980 DAZ2Q13117 558 aaKnown RBP12.27□□□□□ -0.45
TPM1-205ENST00000357980 NDUFAF3Q9BU61 184 aa12.27□□□□□ -0.45
TPM1-205ENST00000357980 MRPL16Q9NX20 251 aaKnown RBP12.27□□□□□ -0.45
TPM1-205ENST00000357980 X6R8D5 127 aa12.27□□□□□ -0.45
TPM1-205ENST00000357980 TNFRSF6BO95407 300 aa12.26□□□□□ -0.45
TPM1-205ENST00000357980 DEFB135Q30KP9 77 aa12.26□□□□□ -0.45
TPM1-205ENST00000357980 FAM74A4Q5TZK3 123 aa12.26□□□□□ -0.45
TPM1-205ENST00000357980 HIST1H2BLQ99880 126 aa12.26□□□□□ -0.45
TPM1-205ENST00000357980 A8MWV9 139 aa12.25□□□□□ -0.45
TPM1-205ENST00000357980 UFSP1Q6NVU6 142 aa12.25□□□□□ -0.45
TPM1-205ENST00000357980 NIT1Q86X76 327 aa12.25□□□□□ -0.45
TPM1-205ENST00000357980 LGALS9BQ3B8N2 356 aa12.25□□□□□ -0.45
TPM1-205ENST00000357980 SMIM9A6NGZ8 99 aa12.24□□□□□ -0.45
TPM1-205ENST00000357980 S100A2P29034 98 aa12.24□□□□□ -0.45
TPM1-205ENST00000357980 CFAP126Q5VTH2 177 aa12.24□□□□□ -0.45
TPM1-205ENST00000357980 SUMO4Q6EEV6 95 aa12.24□□□□□ -0.45
TPM1-205ENST00000357980 OVOL2Q9BRP0 275 aa12.24□□□□□ -0.45
TPM1-205ENST00000357980 NOP10Q9NPE3 64 aaKnown RBP12.24□□□□□ -0.45
TPM1-205ENST00000357980 TRGV1A0A0A0MS02 117 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 RNASEKQ6P5S7 137 aaKnown RBP12.23□□□□□ -0.45
TPM1-205ENST00000357980 Q6ZTI0 123 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 Q6ZWC4 215 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 MGAM2Q2M2H8 2515 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 LINC00614P0C842 121 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 FABP4P15090 132 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 IFI27P40305 119 aaPredicted RBP12.23□□□□□ -0.45
TPM1-205ENST00000357980 CHCHD1Q96BP2 118 aaKnown RBP12.23□□□□□ -0.45
TPM1-205ENST00000357980 MAP1LC3AQ9H492 121 aa12.23□□□□□ -0.45
TPM1-205ENST00000357980 LOC389332A0A1B0GUA5 103 aa12.22□□□□□ -0.45
TPM1-205ENST00000357980 PRSS47A8MTI9 375 aa12.22□□□□□ -0.45
TPM1-205ENST00000357980 RS1O15537 224 aa12.22□□□□□ -0.45
TPM1-205ENST00000357980 ZNF56Q15929 161 aa12.22□□□□□ -0.45
TPM1-205ENST00000357980 RPL39LQ96EH5 51 aaKnown RBP12.22□□□□□ -0.45
TPM1-205ENST00000357980 F5H697 171 aa12.21□□□□□ -0.45
TPM1-205ENST00000357980 KPRPQ5T749 579 aaPredicted RBP12.21□□□□□ -0.45
TPM1-205ENST00000357980 PRSS3P2Q8NHM4 247 aa12.21□□□□□ -0.45
TPM1-205ENST00000357980 TMEM18Q96B42 140 aa12.21□□□□□ -0.45
TPM1-205ENST00000357980 RNF183Q96D59 192 aa12.21□□□□□ -0.45
TPM1-205ENST00000357980 M0QY20 66 aa12.21□□□□□ -0.46
TPM1-205ENST00000357980 RIPPLY3P57055 190 aa12.21□□□□□ -0.46
TPM1-205ENST00000357980 OR11H2Q8NH07 326 aa12.21□□□□□ -0.46
TPM1-205ENST00000357980 PACRGQ96M98 296 aaPredicted RBP12.21□□□□□ -0.46
TPM1-205ENST00000357980 IGLV2-18A0A075B6J9 118 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 RHODO00212 210 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 HSBP1O75506 76 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 PPP1R17O96001 155 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 EDA2RQ9HAV5 297 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 AP5S1Q9NUS5 200 aa12.2□□□□□ -0.46
TPM1-205ENST00000357980 LINC01546A6NGU7 62 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 AMTP48728 403 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 AKR1D1P51857 326 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 SUMO2P61956 95 aaKnown RBP12.19□□□□□ -0.46
TPM1-205ENST00000357980 ZFP2Q6ZN57 461 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 FA2HQ7L5A8 372 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 FAM19A2Q8N3H0 131 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 C20orf78Q9BR46 151 aa12.19□□□□□ -0.46
TPM1-205ENST00000357980 IGHV3-73A0A0B4J1V6 119 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 PMCHP20382 165 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 NXT2Q9NPJ8 142 aaKnown RBP12.18□□□□□ -0.46
TPM1-205ENST00000357980 TRAV4A0A0B4J268 109 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 EMP1P54849 157 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 Q8NAQ8 132 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 SMIM2Q9BVW6 85 aa12.18□□□□□ -0.46
TPM1-205ENST00000357980 IGHV1-24A0A0C4DH33 117 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 PMCHL1Q16048 86 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 Q6ZSN1 163 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 LINC00612Q8N6U2 182 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 Q8N8P6 123 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 OR4C5Q8NGB2 326 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 OR10D4PQ8NGN7 298 aa12.17□□□□□ -0.46
TPM1-205ENST00000357980 TRBV6-5A0A0K0K1A5 114 aa12.16□□□□□ -0.46
TPM1-205ENST00000357980 GAGE12BA1L429 117 aa12.16□□□□□ -0.46
TPM1-205ENST00000357980 GAGE7O76087 117 aa12.16□□□□□ -0.46
TPM1-205ENST00000357980 GAGE12FP0CL80 117 aa12.16□□□□□ -0.46
TPM1-205ENST00000357980 GAGE12GP0CL81 117 aa12.16□□□□□ -0.46
TPM1-205ENST00000357980 GAGE12IP0CL82 117 aa12.16□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms