RNA–Protein interactions for RNA: ENST00000357783.6

PHTF1-201, Transcript of putative homeodomain transcription factor 1, humanhuman

TSL 1 (best) BASIC

Gene PHTF1, Length 2,747 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF1-201ENST00000357783 SONP18583 2426 aaKnown RBP11.77□□□□□ -0.53
PHTF1-201ENST00000357783 IGHV3-16A0A0C4DH30 117 aa11.77□□□□□ -0.53
PHTF1-201ENST00000357783 F5H697 171 aa11.77□□□□□ -0.53
PHTF1-201ENST00000357783 K7ERU9 68 aa11.77□□□□□ -0.53
PHTF1-201ENST00000357783 SUMO4Q6EEV6 95 aa11.77□□□□□ -0.53
PHTF1-201ENST00000357783 POM121L12Q8N7R1 296 aa11.77□□□□□ -0.53
PHTF1-201ENST00000357783 PPP1R17O96001 155 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 C2orf66Q6UXQ4 117 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 Q8N1Y9 231 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 ITPR3Q14573 2671 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 FAM74A4Q5TZK3 123 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 DUX3Q96PT4 197 aa11.76□□□□□ -0.53
PHTF1-201ENST00000357783 KHDC1LQ5JSQ8 128 aa11.75□□□□□ -0.53
PHTF1-201ENST00000357783 HIST2H2BDQ6DRA6 164 aa11.75□□□□□ -0.53
PHTF1-201ENST00000357783 KRTAP1-3Q8IUG1 177 aa11.75□□□□□ -0.53
PHTF1-201ENST00000357783 K7EMI3 77 aa11.75□□□□□ -0.53
PHTF1-201ENST00000357783 C9orf85Q96MD7 179 aa11.75□□□□□ -0.53
PHTF1-201ENST00000357783 IGHV1OR15-1A0A075B7D0 117 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 DUSP14O95147 198 aaKnown RBP11.74□□□□□ -0.53
PHTF1-201ENST00000357783 PLNP26678 52 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 FOXI2Q6ZQN5 318 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 NBPF19A0A087WUL8 3843 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 TRAV12-1A0A0B4J245 112 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 F8VRH5 84 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 H7C1H1 209 aa11.74□□□□□ -0.53
PHTF1-201ENST00000357783 A6NDN8 102 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 KNCNA6PVL3 124 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 Q8N2B8 174 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 CHTOPQ9Y3Y2 248 aaKnown RBP11.73□□□□□ -0.53
PHTF1-201ENST00000357783 CUBNO60494 3623 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 NEXN-AS1Q8NBZ9 246 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 CCDC168Q8NDH2 2452 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 AMTNQ6UX39 209 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 OR11H1Q8NG94 326 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 BAALCQ8WXS3 180 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 CHAC1Q9BUX1 264 aa11.73□□□□□ -0.53
PHTF1-201ENST00000357783 SYT8Q8NBV8 401 aa11.72□□□□□ -0.53
PHTF1-201ENST00000357783 TRBV25-1A0A075B6N4 114 aa11.72□□□□□ -0.53
PHTF1-201ENST00000357783 LINC01619G3V211 115 aa11.72□□□□□ -0.53
PHTF1-201ENST00000357783 DEFB131AP59861 70 aa11.72□□□□□ -0.53
PHTF1-201ENST00000357783 ZNF56Q15929 161 aa11.72□□□□□ -0.53
PHTF1-201ENST00000357783 HLA-DRB4P13762 266 aa11.71□□□□□ -0.53
PHTF1-201ENST00000357783 UFSP1Q6NVU6 142 aa11.71□□□□□ -0.53
PHTF1-201ENST00000357783 MAPKAPK5-AS1Q8N8E1 139 aa11.71□□□□□ -0.53
PHTF1-201ENST00000357783 HLA-DRB4X5D2U9 266 aa11.71□□□□□ -0.53
PHTF1-201ENST00000357783 GCSHP23434 173 aa11.71□□□□□ -0.54
PHTF1-201ENST00000357783 POLR2KP53803 58 aaKnown RBP11.71□□□□□ -0.54
PHTF1-201ENST00000357783 NAA38Q9BRA0 125 aaKnown RBP11.71□□□□□ -0.54
PHTF1-201ENST00000357783 HIGD1BQ9P298 99 aa11.71□□□□□ -0.54
PHTF1-201ENST00000357783 RAB37Q96AX2 223 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 TP53TG1Q9Y2A0 90 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 SDHAF1A6NFY7 115 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 TMEM238C9JI98 176 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 SAP30O75446 220 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1A1P0DJD3 496 aaKnown RBP11.7□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1CP0DJD4 496 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 HTN1P15515 57 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1FQ15415 496 aaKnown RBP11.7□□□□□ -0.54
PHTF1-201ENST00000357783 ZFP2Q6ZN57 461 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 WFDC11Q8NEX6 87 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 CYSLTR1Q9Y271 337 aa11.7□□□□□ -0.54
PHTF1-201ENST00000357783 FLNAP21333 2647 aaKnown RBP11.7□□□□□ -0.54
PHTF1-201ENST00000357783 GAGE10A6NGK3 116 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 PRSS29PA6NIE9 313 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 H3BRM9 83 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 VCYO14598 125 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 RPL32P62910 135 aaKnown RBP11.69□□□□□ -0.54
PHTF1-201ENST00000357783 HIST2H2BCQ6DN03 193 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 TMEM61Q8N0U2 210 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 KLHL30-AS1Q8NEE0 82 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 KIR2DL4Q99706 377 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 CRYGDP07320 174 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 C4orf3Q8WVX3 66 aa11.69□□□□□ -0.54
PHTF1-201ENST00000357783 TENM4Q6N022 2769 aa11.68□□□□□ -0.54
PHTF1-201ENST00000357783 RPL39P62891 51 aaKnown RBP11.68□□□□□ -0.54
PHTF1-201ENST00000357783 ZNF876PQ49A33 203 aa11.68□□□□□ -0.54
PHTF1-201ENST00000357783 ZNF256Q9Y2P7 627 aaPredicted RBP11.68□□□□□ -0.54
PHTF1-201ENST00000357783 FXYD2P54710 66 aa11.68□□□□□ -0.54
PHTF1-201ENST00000357783 DLX4Q92988 240 aaPredicted RBP11.68□□□□□ -0.54
PHTF1-201ENST00000357783 PEMTQ9UBM1 199 aa11.68□□□□□ -0.54
PHTF1-201ENST00000357783 AKAP9Q99996 3911 aa11.68□□□□□ -0.54
PHTF1-201ENST00000357783 C9orf118A6NHY6 69 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 H3BUT2 72 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 MORN3Q6PF18 240 aaPredicted RBP11.67□□□□□ -0.54
PHTF1-201ENST00000357783 JMJD8Q96S16 334 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 CHD6Q8TD26 2715 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 NF1P21359 2839 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 TRGV11A0A075B6L2 103 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 M0QY20 66 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 GTF2H5Q6ZYL4 71 aa11.67□□□□□ -0.54
PHTF1-201ENST00000357783 WNK1Q9H4A3 2382 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1BA6NDE4 496 aaKnown RBP11.66□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1EA6NEQ0 496 aaKnown RBP11.66□□□□□ -0.54
PHTF1-201ENST00000357783 TSHBP01222 138 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 RBMY1DP0C7P1 496 aaKnown RBP11.66□□□□□ -0.54
PHTF1-201ENST00000357783 RIPPLY3P57055 190 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 DYNLRB2Q8TF09 96 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 G3V4G9 280 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 H3BMM0 161 aa11.66□□□□□ -0.54
PHTF1-201ENST00000357783 TRBV6-5A0A0K0K1A5 114 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms