RNA–Protein interactions for RNA: ENST00000357475.8

SSBP3-202, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best) BASIC

Gene SSBP3, Length 1,533 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-202ENST00000357475 KIF25-AS1Q9Y6Z4 181 aa17.9■□□□□ 0.46
SSBP3-202ENST00000357475 A8MWV9 139 aa17.89■□□□□ 0.45
SSBP3-202ENST00000357475 TMEM88Q6PEY1 159 aa17.89■□□□□ 0.45
SSBP3-202ENST00000357475 CBLN2Q8IUK8 224 aa17.89■□□□□ 0.45
SSBP3-202ENST00000357475 SCO1O75880 301 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 ATP5G1P05496 136 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 Q6ZSN1 163 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 A0A1B0GXF2 115 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 CAMPP49913 170 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 RIGQ13278 110 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 FHL2Q14192 279 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 KCNIP4Q6PIL6 250 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 AP1S3Q96PC3 154 aa17.88■□□□□ 0.45
SSBP3-202ENST00000357475 CSMD3Q7Z407 3707 aa17.87■□□□□ 0.45
SSBP3-202ENST00000357475 LINC00315P59091 139 aa17.87■□□□□ 0.45
SSBP3-202ENST00000357475 STARD9Q9P2P6 4700 aa17.85■□□□□ 0.45
SSBP3-202ENST00000357475 DYNC2H1Q8NCM8 4307 aaKnown RBP17.85■□□□□ 0.45
SSBP3-202ENST00000357475 DEFB131BA0A096LNP1 70 aa17.85■□□□□ 0.45
SSBP3-202ENST00000357475 S100PP25815 95 aa17.85■□□□□ 0.45
SSBP3-202ENST00000357475 BTF3L4Q96K17 158 aa17.85■□□□□ 0.45
SSBP3-202ENST00000357475 F5H768 121 aa17.84■□□□□ 0.45
SSBP3-202ENST00000357475 TRGC1P0CF51 173 aa17.84■□□□□ 0.45
SSBP3-202ENST00000357475 S100A1P23297 94 aa17.84■□□□□ 0.45
SSBP3-202ENST00000357475 ELOBQ15370 118 aa17.84■□□□□ 0.45
SSBP3-202ENST00000357475 PHLDA1Q8WV24 401 aaPredicted RBP17.84■□□□□ 0.45
SSBP3-202ENST00000357475 TGIF2-C20orf24A0A0A6YYL0 155 aa17.83■□□□□ 0.45
SSBP3-202ENST00000357475 HBBP68871 147 aa17.83■□□□□ 0.45
SSBP3-202ENST00000357475 YPEL4Q96NS1 127 aa17.83■□□□□ 0.45
SSBP3-202ENST00000357475 TRGV4A0A0C4DH28 118 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 ATP5L2Q7Z4Y8 100 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 TRAV10A0A0B4J240 114 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 MGPP08493 103 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 ZFP2Q6ZN57 461 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 DPH3P1Q9H4G8 78 aa17.82■□□□□ 0.44
SSBP3-202ENST00000357475 SMIM17P0DL12 118 aa17.81■□□□□ 0.44
SSBP3-202ENST00000357475 WWC2-AS2Q96NR7 200 aa17.81■□□□□ 0.44
SSBP3-202ENST00000357475 TMEM191AQ9H0A3 160 aa17.81■□□□□ 0.44
SSBP3-202ENST00000357475 Q9UF83 564 aa17.81■□□□□ 0.44
SSBP3-202ENST00000357475 TRAV9-1A0A075B6T8 112 aa17.8■□□□□ 0.44
SSBP3-202ENST00000357475 RHODO00212 210 aa17.8■□□□□ 0.44
SSBP3-202ENST00000357475 GATA1P15976 413 aaPredicted RBP17.8■□□□□ 0.44
SSBP3-202ENST00000357475 ZNF56Q15929 161 aa17.8■□□□□ 0.44
SSBP3-202ENST00000357475 AMN1Q8IY45 258 aa17.8■□□□□ 0.44
SSBP3-202ENST00000357475 SMCO4Q9NRQ5 59 aa17.8■□□□□ 0.44
SSBP3-202ENST00000357475 A0A0J9YY99 117 aa17.79■□□□□ 0.44
SSBP3-202ENST00000357475 RNF185Q96GF1 192 aa17.79■□□□□ 0.44
SSBP3-202ENST00000357475 VSIG2Q96IQ7 327 aa17.79■□□□□ 0.44
SSBP3-202ENST00000357475 TRAV26-1A0A087WT03 109 aa17.78■□□□□ 0.44
SSBP3-202ENST00000357475 ZFAND6Q6FIF0 208 aa17.78■□□□□ 0.44
SSBP3-202ENST00000357475 SLC25A29Q8N8R3 303 aa17.78■□□□□ 0.44
SSBP3-202ENST00000357475 GATD1Q8NB37 220 aa17.78■□□□□ 0.44
SSBP3-202ENST00000357475 HHLA3Q9XRX5 114 aa17.78■□□□□ 0.44
SSBP3-202ENST00000357475 TRAV26-2A0A0B4J265 109 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 A0A1B0GW15 77 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 F5H697 171 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 P0DMU3 169 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 FAM231AP0DMU4 169 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 FAM231CP0DMU5 169 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 CRYBA4P53673 196 aa17.77■□□□□ 0.44
SSBP3-202ENST00000357475 LOC100131303A0A0U1RQF7 123 aa17.77■□□□□ 0.43
SSBP3-202ENST00000357475 SUMO4Q6EEV6 95 aa17.77■□□□□ 0.43
SSBP3-202ENST00000357475 SMIM15Q7Z3B0 74 aa17.77■□□□□ 0.43
SSBP3-202ENST00000357475 PLECQ15149 4684 aaKnown RBP17.76■□□□□ 0.43
SSBP3-202ENST00000357475 GAS8-AS1O95177 125 aa17.76■□□□□ 0.43
SSBP3-202ENST00000357475 RAB4AP20338 218 aa17.76■□□□□ 0.43
SSBP3-202ENST00000357475 RAB4BP61018 213 aa17.76■□□□□ 0.43
SSBP3-202ENST00000357475 MUC7Q8TAX7 377 aa17.76■□□□□ 0.43
SSBP3-202ENST00000357475 CIDEAO60543 219 aa17.75■□□□□ 0.43
SSBP3-202ENST00000357475 TMEM136Q6ZRR5 245 aa17.75■□□□□ 0.43
SSBP3-202ENST00000357475 PRO0255Q9UI72 69 aa17.75■□□□□ 0.43
SSBP3-202ENST00000357475 TRBV24-1A0A075B6N3 115 aa17.74■□□□□ 0.43
SSBP3-202ENST00000357475 PAX4O43316 350 aa17.73■□□□□ 0.43
SSBP3-202ENST00000357475 S100A8P05109 93 aa17.73■□□□□ 0.43
SSBP3-202ENST00000357475 FAM104BQ5XKR9 115 aa17.73■□□□□ 0.43
SSBP3-202ENST00000357475 CEMP1Q6PRD7 247 aaPredicted RBP17.73■□□□□ 0.43
SSBP3-202ENST00000357475 TRBV6-4A0A1B0GX49 114 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 K7EQD1 137 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 RASL11AQ6T310 242 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 IGLL5B9A064 214 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 SMKR1H3BMG3 65 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 M0QY20 66 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 MRPL51Q4U2R6 128 aaKnown RBP17.72■□□□□ 0.43
SSBP3-202ENST00000357475 FAM210BQ96KR6 192 aa17.72■□□□□ 0.43
SSBP3-202ENST00000357475 SLAQ13239 276 aa17.71■□□□□ 0.43
SSBP3-202ENST00000357475 NCR2O95944 276 aa17.7■□□□□ 0.42
SSBP3-202ENST00000357475 GYPEP15421 78 aa17.69■□□□□ 0.42
SSBP3-202ENST00000357475 RHOHQ15669 191 aa17.69■□□□□ 0.42
SSBP3-202ENST00000357475 NUPR2A6NF83 97 aa17.68■□□□□ 0.42
SSBP3-202ENST00000357475 RPS10P46783 165 aaKnown RBP17.68■□□□□ 0.42
SSBP3-202ENST00000357475 RPL39LQ96EH5 51 aaKnown RBP17.68■□□□□ 0.42
SSBP3-202ENST00000357475 COLCA2A8K830 154 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GNB1LQ9BYB4 327 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 TENM2Q9NT68 2774 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GAGE12JA6NER3 117 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GAGE1Q13065 139 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GAGE4Q13068 117 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GAGE5Q13069 117 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 GAGE13Q4V321 117 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 NEXN-AS1Q8NBZ9 246 aa17.67■□□□□ 0.42
SSBP3-202ENST00000357475 PRADC1Q9BSG0 188 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms