RNA–Protein interactions for RNA: ENST00000357250.10

COL9A1-202, Transcript of collagen type IX alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL9A1, Length 4,761 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-202ENST00000357250 C16orf74Q96GX8 76 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 DSCR8Q96T75 97 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 C11orf1Q9H5F2 150 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 PLA2G2EQ9NZK7 142 aa9.13□□□□□ -0.95
COL9A1-202ENST00000357250 ANGP03950 147 aaKnown RBP9.12□□□□□ -0.95
COL9A1-202ENST00000357250 HIVEP2P31629 2446 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 DAZ2Q13117 558 aaKnown RBP9.12□□□□□ -0.95
COL9A1-202ENST00000357250 DAZ4Q86SG3 579 aaKnown RBP9.12□□□□□ -0.95
COL9A1-202ENST00000357250 C5orf56Q8N8D9 126 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 DAZ3Q9NR90 486 aaKnown RBP9.12□□□□□ -0.95
COL9A1-202ENST00000357250 CHD9Q3L8U1 2897 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 IGHV4-61A0A0C4DH41 118 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 GAGE12HA6NDE8 117 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 TEX22C9J3V5 150 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 AJUBAQ96IF1 538 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 LINC00574Q9H8X3 128 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 F6UB75 175 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 H3BQ85 93 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 CRLF1O75462 422 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 GPHB5Q86YW7 130 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 DEFB113Q30KQ7 82 aa9.12□□□□□ -0.95
COL9A1-202ENST00000357250 H3BMG7 143 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 ASPHD1Q5U4P2 390 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 H0YGX0 51 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 C22orf34Q6ZV56 151 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 TIMM17AQ99595 171 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 NXPH4O95158 308 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 C9orf66Q5T8R8 295 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 SUMO4Q6EEV6 95 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 ZFP2Q6ZN57 461 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 LRRK2Q5S007 2527 aa9.11□□□□□ -0.95
COL9A1-202ENST00000357250 FSTL3O95633 263 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 P0C879 139 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 ODF3L1Q8IXM7 274 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 XIRP2A4UGR9 3374 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 KMT2EQ8IZD2 1858 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 IGLV2-14P01704 120 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 Q9H8V8 135 aa9.1□□□□□ -0.95
COL9A1-202ENST00000357250 NOP10Q9NPE3 64 aaKnown RBP9.1□□□□□ -0.95
COL9A1-202ENST00000357250 IGHG2P01859 326 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 PCP2Q8IVA1 136 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 ANKRD29Q8N6D5 301 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 SORL1Q92673 2214 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 CDH23Q9H251 3354 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 ABCA12Q86UK0 2595 aa9.09□□□□□ -0.95
COL9A1-202ENST00000357250 FASNP49327 2511 aaKnown RBP9.08□□□□□ -0.96
COL9A1-202ENST00000357250 C10orf142B7Z368 130 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 K7EQD1 137 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 Q8NA96 180 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 K7ERJ3 54 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 MRPL23Q16540 153 aaKnown RBP9.08□□□□□ -0.96
COL9A1-202ENST00000357250 NRGNQ92686 78 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 ORMDL1Q9P0S3 153 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 ARHGAP32A7KAX9 2087 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 HAMPP81172 84 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 NTN5Q8WTR8 489 aaPredicted RBP9.08□□□□□ -0.96
COL9A1-202ENST00000357250 GTSF1Q8WW33 167 aa9.08□□□□□ -0.96
COL9A1-202ENST00000357250 NCKAP5O14513 1909 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 IGKV1OR2-108A0A075B7D4 117 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 IGHV4-30-2A0A087WSY4 118 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 IGLL5B9A064 214 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 IGHV4-38-2P0DP08 117 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 ADORA2A-AS1P86434 159 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 MAJINQ3KP22 176 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 CGB3P0DN86 165 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 CGB7P0DN87 165 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 C19orf71A6NCJ1 209 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 Q8N7P7 452 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 RITA1Q96K30 269 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 GATA1P15976 413 aaPredicted RBP9.07□□□□□ -0.96
COL9A1-202ENST00000357250 SIRPDQ9H106 197 aa9.07□□□□□ -0.96
COL9A1-202ENST00000357250 NACAE9PAV3 2078 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 ANKRD39Q53RE8 183 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 EPG5Q9HCE0 2579 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-202ENST00000357250 IGKV2-29A2NJV5 120 aaPredicted RBP9.06□□□□□ -0.96
COL9A1-202ENST00000357250 ATP5G1P05496 136 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 BLCAPP62952 87 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 ATP6V0E2Q8NHE4 81 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 RPL39LQ96EH5 51 aaKnown RBP9.06□□□□□ -0.96
COL9A1-202ENST00000357250 ZMAT4Q9H898 229 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 E9PLD3 99 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 PLA2G5P39877 138 aa9.06□□□□□ -0.96
COL9A1-202ENST00000357250 SPART-AS1P0CW21 52 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 AMTNQ6UX39 209 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 SPATA12Q7Z6I5 190 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 POLQO75417 2590 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 C2orf70A6NJV1 201 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 BAALC-AS2P0C853 105 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 Q6ZPA2 131 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 MSRB1Q9NZV6 116 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 TNRC6AQ8NDV7 1962 aaKnown RBP9.05□□□□□ -0.96
COL9A1-202ENST00000357250 NUPR1O60356 82 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 MYCNOSP40205 109 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 CXCL5P42830 114 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 ZNF503Q96F45 646 aa9.05□□□□□ -0.96
COL9A1-202ENST00000357250 C11orf86A6NJI1 115 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 XCL1P47992 114 aa9.04□□□□□ -0.96
COL9A1-202ENST00000357250 C1orf43Q9BWL3 253 aa9.04□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 147.3 ms