RNA–Protein interactions for RNA: ENST00000357235.5

CDC42SE1-201, Transcript of CDC42 small effector 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDC42SE1, Length 3,045 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-201ENST00000357235 CACNA1AO00555 2505 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 CDSNQ15517 529 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 NRACQ8N912 160 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 Q8N9W7 124 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 PRADC1Q9BSG0 188 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 CNFNQ9BYD5 112 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 NDUFA7O95182 113 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 CD7P09564 240 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 ZFP36P26651 326 aaKnown RBP6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 TMEM190Q8WZ59 177 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 SLC50A1Q9BRV3 221 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 PHLDA3Q9Y5J5 127 aa6.28□□□□□ -1.4
CDC42SE1-201ENST00000357235 IGLV2-18A0A075B6J9 118 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 IGHV7-4-1A0A0J9YVY3 117 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 ZNF815PA8K554 130 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 OOSP1A8MZH6 123 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 HERVK_113P63121 156 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 COX8CQ7Z4L0 72 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 KLHL30-AS1Q8NEE0 82 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 MSRB2Q9Y3D2 182 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 LINC01546A6NGU7 62 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 ODF3BA8MYP8 253 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 F8VRH5 84 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 H7C1H1 209 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 M0R1W7 72 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 PRR9Q5T870 116 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 CCDC140Q96MF4 163 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 SMIM2Q9BVW6 85 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 ZFAND3Q9H8U3 227 aa6.27□□□□□ -1.41
CDC42SE1-201ENST00000357235 F6UB75 175 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 TEX49A0A1B0GTD5 131 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 CLPSL1A2RUU4 121 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 RNASE4P34096 147 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 SAA4P35542 130 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 CRIP2P52943 208 aaPredicted RBP6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 SUMO2P61956 95 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 ZNF56Q15929 161 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 C2orf66Q6UXQ4 117 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRPT1Q86TN4 253 aaKnown RBP6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 TMEM101Q96IK0 257 aa6.26□□□□□ -1.41
CDC42SE1-201ENST00000357235 A0A1B0GX51 115 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 IGHV3-11P01762 117 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 SLC25A16P16260 332 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 EEF1AKMT3Q96AZ1 226 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 EDA2RQ9HAV5 297 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 F5H697 171 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 C3orf22Q8N5N4 141 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 BAALCQ8WXS3 180 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 PRO1854Q9UHT4 67 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 HRNRQ86YZ3 2850 aaPredicted RBP6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 M0R2P5 195 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 GNRH2O43555 120 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 FAM110DQ8TAY7 271 aaPredicted RBP6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 SORL1Q92673 2214 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 CUBNO60494 3623 aa6.25□□□□□ -1.41
CDC42SE1-201ENST00000357235 FAM236AA0A1B0GUQ0 79 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 FAM236BA0A1B0GV22 79 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 F5H768 121 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 ORMDL2Q53FV1 153 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 PLEKHB2Q96CS7 222 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 RBAKDNA6NC62 111 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 H3BMM0 161 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 LGALS9O00182 355 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 UQCRQO14949 82 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 CFC1BP0CG36 223 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 CFC1P0CG37 223 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 SRSF2Q01130 221 aaKnown RBP6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 Q8N6K4 173 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 UBE2WQ96B02 151 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 C20orf173Q96LM9 149 aa6.24□□□□□ -1.41
CDC42SE1-201ENST00000357235 H7C2G1 150 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRBV12-3P01733 135 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 RPL13AP40429 203 aaKnown RBP6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 PMVKQ15126 192 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 TMEM170BQ5T4T1 132 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 FAM74A4Q5TZK3 123 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 UNQ9165/PRO28630Q6UXU0 137 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 KLK5Q9Y337 293 aaPredicted RBP6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRGV11A0A075B6L2 103 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 A0A087WWL8 130 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRBV7-7A0A0K0K1E9 115 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 RPS28P62857 69 aaKnown RBP6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 MINOS1Q5TGZ0 78 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 DPH3P1Q9H4G8 78 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 JPT2Q9H910 190 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 MINOS1-NBL1R4GNA1 71 aa6.23□□□□□ -1.41
CDC42SE1-201ENST00000357235 DOPEY2Q9Y3R5 2298 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 CSPG4Q6UVK1 2322 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 IGHV3-64A0A075B6Q5 118 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRAV12-1A0A0B4J245 112 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 TRAV21A0A0B4J279 112 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 IGKV3-20P01619 116 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 RPL39P62891 51 aaKnown RBP6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 ATXN8Q156A1 80 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 LY6EQ16553 131 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 LINC01620Q4KN68 170 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 BRD3OSQ6XYD6 125 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 C9orf47Q6ZRZ4 202 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 NEXN-AS1Q8NBZ9 246 aa6.22□□□□□ -1.41
CDC42SE1-201ENST00000357235 TOMM6Q96B49 74 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms