RNA–Protein interactions for RNA: ENST00000355815.8

SREBF1-202, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SREBF1, Length 4,253 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-202ENST00000355815 I3L2K1 104 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 CRPP02741 224 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 IGHV3-16A0A0C4DH30 117 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 CFC1BP0CG36 223 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 CFC1P0CG37 223 aa10.94□□□□□ -0.66
SREBF1-202ENST00000355815 A4D1N5 150 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 MORN3Q6PF18 240 aaPredicted RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 NDUFA12Q9UI09 145 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 TRAV12-2A0A075B6T6 113 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 TINCRA0A1B0GVN0 87 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 M0R1W7 72 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 OVOL1O14753 267 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 CFHR4Q92496 578 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RNF5Q99942 180 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 KLK9Q9UKQ9 250 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RBMY1BA6NDE4 496 aaKnown RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RBMY1EA6NEQ0 496 aaKnown RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RBMY1DP0C7P1 496 aaKnown RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RBMY1A1P0DJD3 496 aaKnown RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 RBMY1CP0DJD4 496 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 LY6G5BQ8NDX9 201 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 CITED2Q99967 270 aaPredicted RBP10.93□□□□□ -0.66
SREBF1-202ENST00000355815 TACC2O95359 2948 aa10.93□□□□□ -0.66
SREBF1-202ENST00000355815 TNRC18O15417 2968 aaPredicted RBP10.92□□□□□ -0.66
SREBF1-202ENST00000355815 LGALS1P09382 135 aaKnown RBP10.92□□□□□ -0.66
SREBF1-202ENST00000355815 TAL2Q16559 108 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 ZFP2Q6ZN57 461 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 INSL3P51460 131 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 Q71RC1 249 aaPredicted RBP10.92□□□□□ -0.66
SREBF1-202ENST00000355815 TRPT1Q86TN4 253 aaKnown RBP10.92□□□□□ -0.66
SREBF1-202ENST00000355815 LINC01548A6NM66 108 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 VWC2LB2RUY7 222 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 IGKV2D-26A0A0A0MRZ7 120 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 OVOL3O00110 214 aa10.92□□□□□ -0.66
SREBF1-202ENST00000355815 H3BRN7 92 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 CHCHD5Q9BSY4 110 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 AGPAT4-IT1Q9H0P7 198 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 A0A1W2PRX2 142 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 RBAKDNA6NC62 111 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 GNRH2O43555 120 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 C9orf139Q6ZV77 190 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 FASNP49327 2511 aaKnown RBP10.91□□□□□ -0.66
SREBF1-202ENST00000355815 FAM236AA0A1B0GUQ0 79 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 FAM236BA0A1B0GV22 79 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 DUSP14O95147 198 aaKnown RBP10.91□□□□□ -0.66
SREBF1-202ENST00000355815 SPINK13Q1W4C9 94 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 ZNF493Q6ZR52 646 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 RHPN1-AS1Q9BWJ2 59 aa10.91□□□□□ -0.66
SREBF1-202ENST00000355815 ODF1Q14990 250 aa10.9□□□□□ -0.66
SREBF1-202ENST00000355815 IGF2-ASQ6U949 168 aa10.9□□□□□ -0.66
SREBF1-202ENST00000355815 PFN2P35080 140 aa10.9□□□□□ -0.66
SREBF1-202ENST00000355815 LAMTOR3Q9UHA4 124 aa10.9□□□□□ -0.66
SREBF1-202ENST00000355815 PRAC2D3DTV9 90 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 MINOS1Q5TGZ0 78 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 DAND5Q8N907 189 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 MINOS1-NBL1R4GNA1 71 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 PRRC2AP48634 2157 aaKnown RBP10.89□□□□□ -0.67
SREBF1-202ENST00000355815 Q6ZUT4 128 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 DCHS1Q96JQ0 3298 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 IGHV7-81A0A0B4J1V7 117 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 HTN3P15516 51 aa10.89□□□□□ -0.67
SREBF1-202ENST00000355815 HOXD3P31249 432 aaPredicted RBP10.89□□□□□ -0.67
SREBF1-202ENST00000355815 RPL39P62891 51 aaKnown RBP10.88□□□□□ -0.67
SREBF1-202ENST00000355815 UBE2E2Q96LR5 201 aa10.88□□□□□ -0.67
SREBF1-202ENST00000355815 CTSGP08311 255 aa10.88□□□□□ -0.67
SREBF1-202ENST00000355815 SPANXB1Q9NS25 103 aaPredicted RBP10.88□□□□□ -0.67
SREBF1-202ENST00000355815 TMEM14CQ9P0S9 112 aa10.88□□□□□ -0.67
SREBF1-202ENST00000355815 UBE2E1P51965 193 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 BLCAPP62952 87 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 MBD6Q96DN6 1003 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 FANCD2OSQ96PS1 177 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 LINC00574Q9H8X3 128 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 AGRNO00468 2067 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 A0A1B0GXF2 115 aa10.87□□□□□ -0.67
SREBF1-202ENST00000355815 HOXB4P17483 251 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-202ENST00000355815 SP5Q6BEB4 398 aaPredicted RBP10.87□□□□□ -0.67
SREBF1-202ENST00000355815 TRGV1A0A0A0MS02 117 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 A0A0J9YXV3 536 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 MUSTN1Q8IVN3 82 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 IGKV3D-7A0A0C4DH55 119 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 HAMPP81172 84 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 C1orf43Q9BWL3 253 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 TMEM126AQ9H061 195 aa10.86□□□□□ -0.67
SREBF1-202ENST00000355815 COL12A1Q99715 3063 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 CRYGCP07315 174 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 TRACP01848 142 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 LINC01620Q4KN68 170 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 C2orf91Q6ZV80 131 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 JPT2Q9H910 190 aa10.85□□□□□ -0.67
SREBF1-202ENST00000355815 IGHV4-61A0A0C4DH41 118 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 LEPROTO15243 131 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 S100A7L2Q5SY68 101 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 Q8N976 141 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 IGLV11-55A0A075B6I3 123 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 NXPH4O95158 308 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 C6orf226Q5I0X4 101 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 MAPKAPK5-AS1Q8N8E1 139 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 C8orf31Q8N9H6 132 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 TRGV4A0A0C4DH28 118 aa10.84□□□□□ -0.67
SREBF1-202ENST00000355815 TMEM86BQ8N661 226 aa10.84□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 56.1 ms