RNA–Protein interactions for RNA: ENST00000355633.5

HOXA1-202, Transcript of homeobox A1, humanhuman

TSL 1 (best) BASIC

Gene HOXA1, Length 2,016 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA1-202ENST00000355633 ZNF705AQ6ZN79 300 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 BAGE3Q86Y29 109 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 KIR2DL5AQ8N109 375 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 ORMDL3Q8N138 153 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 C14orf178Q8N769 122 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 KIR2DL5BQ8NHK3 375 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 C18orf32Q8TCD1 76 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 IFITM10A6NMD0 228 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 M0R2P5 195 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 ZNF25P17030 456 aaPredicted RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 CKS2P33552 79 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 MRPL52Q86TS9 123 aaKnown RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 RNASE8Q8TDE3 154 aaKnown RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 TMEM263Q8WUH6 116 aaKnown RBP9.87□□□□□ -0.83
HOXA1-202ENST00000355633 SPXQ9BT56 116 aa9.87□□□□□ -0.83
HOXA1-202ENST00000355633 SMIM17P0DL12 118 aa9.86□□□□□ -0.83
HOXA1-202ENST00000355633 IQCJQ1A5X6 159 aa9.86□□□□□ -0.83
HOXA1-202ENST00000355633 CDPF1Q6NVV7 123 aa9.86□□□□□ -0.83
HOXA1-202ENST00000355633 JPT2Q9H910 190 aa9.86□□□□□ -0.83
HOXA1-202ENST00000355633 CHTOPQ9Y3Y2 248 aaKnown RBP9.86□□□□□ -0.83
HOXA1-202ENST00000355633 U3KQK5 164 aa9.86□□□□□ -0.83
HOXA1-202ENST00000355633 SMKR1H3BMG3 65 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 PPBPP02775 128 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 RRN3P1Q2M238 152 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 SAMD5Q5TGI4 173 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 PRELID3AQ96N28 172 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 PRO1933Q9H354 126 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 NCR2O95944 276 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 MGPP08493 103 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 PDZD11Q5EBL8 140 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 PTH2Q96A98 100 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 C16orf74Q96GX8 76 aa9.85□□□□□ -0.83
HOXA1-202ENST00000355633 A0A087WWL8 130 aa9.84□□□□□ -0.83
HOXA1-202ENST00000355633 PIK3CD-AS1Q5SR53 167 aa9.84□□□□□ -0.83
HOXA1-202ENST00000355633 HIST3H2BBQ8N257 126 aa9.84□□□□□ -0.83
HOXA1-202ENST00000355633 IL17DQ8TAD2 202 aa9.84□□□□□ -0.83
HOXA1-202ENST00000355633 KIF25-AS1Q9Y6Z4 181 aa9.84□□□□□ -0.83
HOXA1-202ENST00000355633 M0R143 59 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 SERF1AO75920 110 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 MRAP2Q96G30 205 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 TRAV26-2A0A0B4J265 109 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 LINC00310P59036 64 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 FAM74A4Q5TZK3 123 aa9.83□□□□□ -0.84
HOXA1-202ENST00000355633 MRPL16Q9NX20 251 aaKnown RBP9.83□□□□□ -0.84
HOXA1-202ENST00000355633 NUPR1O60356 82 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 GAS8-AS1O95177 125 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 NPYP01303 97 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 CRYGDP07320 174 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 LINC00315P59091 139 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 SAMD10Q9BYL1 202 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 LAMTOR2Q9Y2Q5 125 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 A8MWV9 139 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 EREGO14944 169 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 DEFB135Q30KP9 77 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 POM121L12Q8N7R1 296 aa9.82□□□□□ -0.84
HOXA1-202ENST00000355633 PLAC8L1A1L4L8 177 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 A8MZ25 164 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 TNFRSF6BO95407 300 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 ESDP10768 282 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 GATA1P15976 413 aaPredicted RBP9.81□□□□□ -0.84
HOXA1-202ENST00000355633 DAZ2Q13117 558 aaKnown RBP9.81□□□□□ -0.84
HOXA1-202ENST00000355633 RASL10AQ92737 203 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 X6R8D5 127 aa9.81□□□□□ -0.84
HOXA1-202ENST00000355633 TRGV1A0A0A0MS02 117 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 SMIM9A6NGZ8 99 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 F5H697 171 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 JOSD1Q15040 202 aaPredicted RBP9.8□□□□□ -0.84
HOXA1-202ENST00000355633 NIT1Q86X76 327 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 NOP10Q9NPE3 64 aaKnown RBP9.8□□□□□ -0.84
HOXA1-202ENST00000355633 LOC389332A0A1B0GUA5 103 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 ZNF56Q15929 161 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 RNASEKQ6P5S7 137 aaKnown RBP9.8□□□□□ -0.84
HOXA1-202ENST00000355633 NRACQ8N912 160 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 PRSS3P2Q8NHM4 247 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 URB1-AS1Q96HZ7 61 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 PACRGQ96M98 296 aaPredicted RBP9.8□□□□□ -0.84
HOXA1-202ENST00000355633 MAP1LC3AQ9H492 121 aa9.8□□□□□ -0.84
HOXA1-202ENST00000355633 PRSS47A8MTI9 375 aa9.79□□□□□ -0.84
HOXA1-202ENST00000355633 RIPPLY3P57055 190 aa9.79□□□□□ -0.84
HOXA1-202ENST00000355633 LGALS9BQ3B8N2 356 aa9.79□□□□□ -0.84
HOXA1-202ENST00000355633 SUMO4Q6EEV6 95 aa9.79□□□□□ -0.84
HOXA1-202ENST00000355633 CIDEAO60543 219 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 FABP4P15090 132 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 CFAP126Q5VTH2 177 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 Q6ZTI0 123 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 Q6ZWC4 215 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 TMEM18Q96B42 140 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 CHCHD1Q96BP2 118 aaKnown RBP9.78□□□□□ -0.84
HOXA1-202ENST00000355633 HIST1H2BLQ99880 126 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 OVOL2Q9BRP0 275 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 SNHG12Q9BXW3 62 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 CMYA5Q8N3K9 4069 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 RS1O15537 224 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 HSBP1O75506 76 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 IFI27P40305 119 aaPredicted RBP9.78□□□□□ -0.84
HOXA1-202ENST00000355633 FA2HQ7L5A8 372 aa9.78□□□□□ -0.84
HOXA1-202ENST00000355633 IGHV3-73A0A0B4J1V6 119 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 HSBP1L1C9JCN9 74 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 RHODO00212 210 aa9.77□□□□□ -0.85
HOXA1-202ENST00000355633 PPP1R17O96001 155 aa9.77□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms