RNA–Protein interactions for RNA: ENST00000353414.8

COL11A1-201, Transcript of collagen type XI alpha 1 chain, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene COL11A1, Length 7,173 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL11A1-201ENST00000353414 IGLL1P15814 213 aa7.78□□□□□ -1.16
COL11A1-201ENST00000353414 C12orf74Q32Q52 190 aa7.78□□□□□ -1.16
COL11A1-201ENST00000353414 PLXNB3Q9ULL4 1909 aa7.78□□□□□ -1.16
COL11A1-201ENST00000353414 FAM236AA0A1B0GUQ0 79 aa7.77□□□□□ -1.16
COL11A1-201ENST00000353414 FAM236BA0A1B0GV22 79 aa7.77□□□□□ -1.16
COL11A1-201ENST00000353414 TRBV12-3P01733 135 aa7.77□□□□□ -1.16
COL11A1-201ENST00000353414 ADCYAP1P18509 176 aa7.77□□□□□ -1.16
COL11A1-201ENST00000353414 CEP192Q8TEP8 1941 aa7.77□□□□□ -1.16
COL11A1-201ENST00000353414 P0DMU3 169 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 FAM231AP0DMU4 169 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 FAM231CP0DMU5 169 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 Q8TCH9 128 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 SND1-IT1Q9HBX3 110 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 HIGD2AQ9BW72 106 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 A0A087WZ39 114 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 TRBV6-6A0A0A6YYG2 114 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 C15orf65H3BRN8 121 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 C11orf45Q8TAV5 145 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 PYGO2Q9BRQ0 406 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 SIRPDQ9H106 197 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 LY6G6CO95867 125 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 IGLC1P0CG04 106 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 PCP2Q8IVA1 136 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 AGPAT4-IT1Q9H0P7 198 aa7.77□□□□□ -1.17
COL11A1-201ENST00000353414 SMIM27A0A1W2PRY6 76 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 ZNF491Q8N8L2 437 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 TRAV26-1A0A087WT03 109 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 IGHV2-70P01814 119 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 COX8AP10176 69 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 NREPQ16612 68 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 V9GYV3 84 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 TRAV1-1A0A0B4J248 108 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 CASC2Q6XLA1 102 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 IGHV4-30-4P0DP06 118 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 IGHV4-31P0DP07 118 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 MP68P56378 58 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 Q8N1Y9 231 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 ADORA2A-AS1P86434 159 aa7.76□□□□□ -1.17
COL11A1-201ENST00000353414 F8VRH5 84 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 K7EN84 100 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 TMEM61Q8N0U2 210 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 MSRB1Q9NZV6 116 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 ZNF492Q9P255 531 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 RIF1Q5UIP0 2472 aaKnown RBP7.75□□□□□ -1.17
COL11A1-201ENST00000353414 IGKV2D-26A0A0A0MRZ7 120 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 CEMP1Q6PRD7 247 aaPredicted RBP7.75□□□□□ -1.17
COL11A1-201ENST00000353414 LTAP01374 205 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 PIP4P1Q86T03 277 aa7.75□□□□□ -1.17
COL11A1-201ENST00000353414 C2orf70A6NJV1 201 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 LYL1P12980 280 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 DNAJC9-AS1A6NH13 148 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 CLEC2BQ92478 149 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 PRSS47A8MTI9 375 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 UTRNP46939 3433 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 LINC00482Q8N8I6 264 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 NDUFA1O15239 70 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 B9D2Q9BPU9 175 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 IGKV1D-37A0A075B6S9 117 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 SPINK6Q6UWN8 80 aa7.74□□□□□ -1.17
COL11A1-201ENST00000353414 OPRPNQ99935 248 aaPredicted RBP7.74□□□□□ -1.17
COL11A1-201ENST00000353414 SCXQ7RTU7 201 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 LY96Q9Y6Y9 160 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 PLXNA2O75051 1894 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 IGHV7-81A0A0B4J1V7 117 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 IGLC7A0M8Q6 106 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 PKIGQ9Y2B9 76 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 PRAC2D3DTV9 90 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 FNDC10F2Z333 226 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 SPAG11BQ08648 103 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 ZNF843Q8N446 348 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 ZNF493Q6ZR52 646 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 DSCAMO60469 2012 aa7.73□□□□□ -1.17
COL11A1-201ENST00000353414 FAM19A5Q7Z5A7 132 aaPredicted RBP7.73□□□□□ -1.17
COL11A1-201ENST00000353414 PPDPFQ9H3Y8 114 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 NUP210Q8TEM1 1887 aaPredicted RBP7.72□□□□□ -1.17
COL11A1-201ENST00000353414 MALRD1Q5VYJ5 2156 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 CDPF1Q6NVV7 123 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 C5orf56Q8N8D9 126 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 DAZ2Q13117 558 aaKnown RBP7.72□□□□□ -1.17
COL11A1-201ENST00000353414 DAZ4Q86SG3 579 aaKnown RBP7.72□□□□□ -1.17
COL11A1-201ENST00000353414 DAZ3Q9NR90 486 aaKnown RBP7.72□□□□□ -1.17
COL11A1-201ENST00000353414 A0A0J9YXV3 536 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 CRYGDP07320 174 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 MDFICQ9P1T7 246 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 MUC4Q99102 2169 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 SPANXA1Q9NS26 97 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 Q8NFD4 153 aa7.72□□□□□ -1.17
COL11A1-201ENST00000353414 WFDC10BQ8IUB3 73 aa7.71□□□□□ -1.17
COL11A1-201ENST00000353414 LINC00269Q8N2A0 174 aa7.71□□□□□ -1.17
COL11A1-201ENST00000353414 TP53TG3Q9ULZ0 132 aa7.71□□□□□ -1.17
COL11A1-201ENST00000353414 UBE2D4Q9Y2X8 147 aa7.71□□□□□ -1.17
COL11A1-201ENST00000353414 TET2Q6N021 2002 aaPredicted RBP7.71□□□□□ -1.17
COL11A1-201ENST00000353414 TMEM190Q8WZ59 177 aa7.71□□□□□ -1.17
COL11A1-201ENST00000353414 TRBV7-3A0A075B6L6 115 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 IGLV1-44P01699 117 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 A0A0B4J2C4 111 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 CFC1BP0CG36 223 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 CFC1P0CG37 223 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 Q0VG73 95 aa7.71□□□□□ -1.18
COL11A1-201ENST00000353414 TRAV23DV6A0A075B6W5 121 aa7.71□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 62.4 ms