RNA–Protein interactions for RNA: ENST00000350148.9

SMAD9-201, Transcript of SMAD family member 9, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SMAD9, Length 5,447 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD9-201ENST00000350148 TAL2Q16559 108 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 SPTAN1Q13813 2472 aaKnown RBP9.34□□□□□ -0.91
SMAD9-201ENST00000350148 A4D1N5 150 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 BRI3O95415 125 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 CRIP2P52943 208 aaPredicted RBP9.34□□□□□ -0.91
SMAD9-201ENST00000350148 TOMM7Q9P0U1 55 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 DNAJC9-AS1A6NH13 148 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 PCSK5Q92824 1860 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 HLA-DMBP28068 263 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 TMEM158Q8WZ71 300 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 DNAH14Q0VDD8 3507 aa9.34□□□□□ -0.91
SMAD9-201ENST00000350148 CRPP02741 224 aa9.34□□□□□ -0.92
SMAD9-201ENST00000350148 ACYP1P07311 99 aa9.34□□□□□ -0.92
SMAD9-201ENST00000350148 FGF6P10767 208 aa9.34□□□□□ -0.92
SMAD9-201ENST00000350148 C20orf173Q96LM9 149 aa9.34□□□□□ -0.92
SMAD9-201ENST00000350148 A0A1B0GX51 115 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 AKAP6Q13023 2319 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 SLURP1P55000 103 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 C12orf74Q32Q52 190 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 CUL9Q8IWT3 2517 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 A0A0U1RRA0 63 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 PSMG3-AS1Q96PY0 264 aa9.33□□□□□ -0.92
SMAD9-201ENST00000350148 INSL3P51460 131 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 FOXI1Q12951 378 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 WFDC2Q14508 124 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 C19orf71A6NCJ1 209 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 ADARB2-AS1A8MUL3 147 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 I3L3M4 83 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 TAX1BP3O14907 124 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 RPL32P62910 135 aaKnown RBP9.32□□□□□ -0.92
SMAD9-201ENST00000350148 CARD19Q96LW7 228 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 XCL2Q9UBD3 114 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 ZNF493Q6ZR52 646 aa9.32□□□□□ -0.92
SMAD9-201ENST00000350148 IGKV3D-20A0A0C4DH25 116 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 NDUFV3P56181 108 aaKnown RBP9.31□□□□□ -0.92
SMAD9-201ENST00000350148 LINC00173Q6ZV60 143 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 C1orf159Q96HA4 380 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 CTRLP40313 264 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 SMIM2Q9BVW6 85 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 ZFAND3Q9H8U3 227 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 RS1O15537 224 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 NPYP01303 97 aa9.31□□□□□ -0.92
SMAD9-201ENST00000350148 PRO1854Q9UHT4 67 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 KLK9Q9UKQ9 250 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 A0A087WWL8 130 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 SMKR1H3BMG3 65 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 TEN1Q86WV5 123 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 C5orf42Q9H799 3197 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 WFDC11Q8NEX6 87 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 NEGR1Q7Z3B1 354 aa9.3□□□□□ -0.92
SMAD9-201ENST00000350148 NDUFA11Q86Y39 141 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 TP53TG3Q9ULZ0 132 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 PRR14LQ5THK1 2151 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 MYMXA0A1B0GTQ4 84 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 DAD1P61803 113 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 HAMPP81172 84 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 RHOHQ15669 191 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 LGALS9BQ3B8N2 356 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 LGALS9CQ6DKI2 356 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 CHCHD5Q9BSY4 110 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 LINC01548A6NM66 108 aa9.29□□□□□ -0.92
SMAD9-201ENST00000350148 USP34Q70CQ2 3546 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 MLST8Q9BVC4 326 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 ACACBO00763 2458 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 FAM208BQ5VWN6 2430 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 FAM240AA0A1B0GVK7 77 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 IGLL5B9A064 214 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 DEFB136Q30KP8 78 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 XIRP2A4UGR9 3374 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 IGLV1-40P01703 118 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 UNQ9165/PRO28630Q6UXU0 137 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 Q6ZUT4 128 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP9.28□□□□□ -0.925e-8■■■■■ 38.8
SMAD9-201ENST00000350148 TRAV12-2A0A075B6T6 113 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 A0A1W2PPR1 153 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 RETNQ9HD89 108 aa9.28□□□□□ -0.92
SMAD9-201ENST00000350148 A0A0J9YX75 114 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 SDHAF1A6NFY7 115 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 F6UB75 175 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 HTN3P15516 51 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 PSMB8P28062 276 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 C2orf66Q6UXQ4 117 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 RASL10AQ92737 203 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 IGLV2-8P01709 118 aa9.27□□□□□ -0.93
SMAD9-201ENST00000350148 PRAC2D3DTV9 90 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 ATP5G1P05496 136 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 C16orf74Q96GX8 76 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 ATP6V0E2Q8NHE4 81 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 TRBV12-3P01733 135 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 SPTSSBQ8NFR3 76 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 ZNF702PQ9H963 129 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 IGHV3-73A0A0B4J1V6 119 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 SMIM9A6NGZ8 99 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 UQCRQO14949 82 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 LINC00158P58513 81 aa9.26□□□□□ -0.93
SMAD9-201ENST00000350148 LEPROTO15243 131 aa9.25□□□□□ -0.93
SMAD9-201ENST00000350148 NCOR2Q9Y618 2525 aa9.25□□□□□ -0.93
SMAD9-201ENST00000350148 MT-ATP8P03928 68 aa9.25□□□□□ -0.93
SMAD9-201ENST00000350148 IGF2RP11717 2491 aa9.25□□□□□ -0.93
SMAD9-201ENST00000350148 GTSF1Q8WW33 167 aa9.25□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms