RNA–Protein interactions for RNA: ENST00000349225.2

RLIM-202, Transcript of ring finger protein, LIM domain interacting, humanhuman

APPRIS P1 TSL 2 BASIC

Gene RLIM, Length 3,478 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RLIM-202ENST00000349225 APC2O95996 2303 aa10.7□□□□□ -0.7
RLIM-202ENST00000349225 DPM3Q9P2X0 92 aa10.7□□□□□ -0.7
RLIM-202ENST00000349225 CCDC140Q96MF4 163 aa10.7□□□□□ -0.7
RLIM-202ENST00000349225 IGHV7-81A0A0B4J1V7 117 aa10.69□□□□□ -0.7
RLIM-202ENST00000349225 POLR2KP53803 58 aaKnown RBP10.69□□□□□ -0.7
RLIM-202ENST00000349225 ZNF56Q15929 161 aa10.69□□□□□ -0.7
RLIM-202ENST00000349225 DYNLRB1Q9NP97 96 aa10.69□□□□□ -0.7
RLIM-202ENST00000349225 IGHV1-69DA0A0B4J2H0 117 aa10.69□□□□□ -0.7
RLIM-202ENST00000349225 ZNF22P17026 224 aaPredicted RBP10.69□□□□□ -0.7
RLIM-202ENST00000349225 LGALS3P17931 250 aaKnown RBP10.69□□□□□ -0.7
RLIM-202ENST00000349225 CEMP1Q6PRD7 247 aaPredicted RBP10.69□□□□□ -0.7
RLIM-202ENST00000349225 PHLDA3Q9Y5J5 127 aa10.69□□□□□ -0.7
RLIM-202ENST00000349225 Q1RN00 199 aa10.68□□□□□ -0.7
RLIM-202ENST00000349225 PAPPA-AS1Q5QFB9 102 aa10.68□□□□□ -0.7
RLIM-202ENST00000349225 TMEM223A0PJW6 202 aa10.68□□□□□ -0.7
RLIM-202ENST00000349225 POM121L12Q8N7R1 296 aa10.68□□□□□ -0.7
RLIM-202ENST00000349225 TRBV30A0A0K0K1B3 111 aa10.68□□□□□ -0.7
RLIM-202ENST00000349225 A0A0G2JNJ9 132 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 DEFB109BQ30KR1 87 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 PLA2G2CQ5R387 149 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 C2orf82Q6UX34 121 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 LITAFQ99732 161 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 Q9UFV3 132 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 ADARB2-AS1A8MUL3 147 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 EBI3Q14213 229 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 CLEC2BQ92478 149 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 M0R2P5 195 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 S100A4P26447 101 aaKnown RBP10.67□□□□□ -0.7
RLIM-202ENST00000349225 CLEC19AQ6UXS0 136 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 Q8N6K4 173 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 ITLN2Q8WWU7 325 aaPredicted RBP10.67□□□□□ -0.7
RLIM-202ENST00000349225 YAE1D1Q9NRH1 226 aa10.67□□□□□ -0.7
RLIM-202ENST00000349225 UBE2E1P51965 193 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 MRPL53Q96EL3 112 aaKnown RBP10.66□□□□□ -0.7
RLIM-202ENST00000349225 TIMM17AQ99595 171 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 CELSR1Q9NYQ6 3014 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 TRBV7-7A0A0K0K1E9 115 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 LEPROTO15243 131 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 LINC00694P0DN24 101 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 LY6G5BQ8NDX9 201 aa10.66□□□□□ -0.7
RLIM-202ENST00000349225 ODF3BA8MYP8 253 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 SUMO4Q6EEV6 95 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 CACNA1HO95180 2353 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 LOC107984640A0A0U1RRK4 108 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 ADAMTSL4-AS1Q5T5F5 129 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 TMEM141Q96I45 108 aa10.65□□□□□ -0.7
RLIM-202ENST00000349225 IGHV4OR15-8A0A075B7B6 117 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 A0A087WW49 117 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 A0A0J9YXY3 114 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 LY6HO94772 140 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 MED13LQ71F56 2210 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 A0A087WWL8 130 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 F6UB75 175 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 VMO1Q7Z5L0 202 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 ICOSQ9Y6W8 199 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 U3KQE9 123 aa10.64□□□□□ -0.71
RLIM-202ENST00000349225 TRGV11A0A075B6L2 103 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 OOSP1A8MZH6 123 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 ECSCRQ19T08 205 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 DEFB121Q5J5C9 76 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 SMCR5Q8TEV8 140 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 C16orf92Q96LL3 132 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 PRRC2AP48634 2157 aaKnown RBP10.63□□□□□ -0.71
RLIM-202ENST00000349225 FAM236AA0A1B0GUQ0 79 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 FAM236BA0A1B0GV22 79 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 SDHAF1A6NFY7 115 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 RNASE4P34096 147 aaKnown RBP10.63□□□□□ -0.71
RLIM-202ENST00000349225 Q8N9W7 124 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 TMEM126AQ9H061 195 aa10.63□□□□□ -0.71
RLIM-202ENST00000349225 SPTBN2O15020 2390 aa10.62□□□□□ -0.71
RLIM-202ENST00000349225 TRAV21A0A0B4J279 112 aa10.62□□□□□ -0.71
RLIM-202ENST00000349225 G3V318 75 aa10.62□□□□□ -0.71
RLIM-202ENST00000349225 MRPL23Q16540 153 aaKnown RBP10.62□□□□□ -0.71
RLIM-202ENST00000349225 KLK5Q9Y337 293 aaPredicted RBP10.62□□□□□ -0.71
RLIM-202ENST00000349225 HRNRQ86YZ3 2850 aaPredicted RBP10.62□□□□□ -0.71
RLIM-202ENST00000349225 FAM240AA0A1B0GVK7 77 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 NXPH4O95158 308 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 TRAV16A0A0A6YYK6 109 aaPredicted RBP10.61□□□□□ -0.71
RLIM-202ENST00000349225 A0A0J9YXV3 536 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 FAM19A4Q96LR4 140 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 METTL26Q96S19 204 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 CSDC2Q9Y534 153 aaKnown RBP10.61□□□□□ -0.71
RLIM-202ENST00000349225 ATP6V0E1O15342 81 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 ATP5J2P56134 94 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 NRGNQ92686 78 aa10.61□□□□□ -0.71
RLIM-202ENST00000349225 NPC2P61916 151 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 LENEPQ9Y5L5 61 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 TRBV27A0A0K0K1C4 114 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 FAM110DQ8TAY7 271 aaPredicted RBP10.6□□□□□ -0.71
RLIM-202ENST00000349225 EEF1AKMT3Q96AZ1 226 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 LINC00527Q9UJ94 153 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 ZNF256Q9Y2P7 627 aaPredicted RBP10.6□□□□□ -0.71
RLIM-202ENST00000349225 H3BT86 120 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 VCYO14598 125 aa10.6□□□□□ -0.71
RLIM-202ENST00000349225 PPP1R17O96001 155 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 FAM104AQ969W3 186 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 SPANXA1Q9NS26 97 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 TRAV8-3A0A0A6YYJ7 113 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 A0A0J9YX75 114 aa10.59□□□□□ -0.71
RLIM-202ENST00000349225 LST1O00453 97 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms