RNA–Protein interactions for RNA: ENST00000347635.8

NUP50-201, Transcript of nucleoporin 50, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP50, Length 5,233 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-201ENST00000347635 UBE2E2Q96LR5 201 aa11.26□□□□□ -0.61
NUP50-201ENST00000347635 SMAD5-AS1Q9Y6J3 95 aa11.26□□□□□ -0.61
NUP50-201ENST00000347635 ADAMTS20P59510 1910 aa11.26□□□□□ -0.61
NUP50-201ENST00000347635 IGHV3-16A0A0C4DH30 117 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 RPL39P62891 51 aaKnown RBP11.25□□□□□ -0.61
NUP50-201ENST00000347635 GATD1Q8NB37 220 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 ZNF625Q96I27 306 aaPredicted RBP11.25□□□□□ -0.61
NUP50-201ENST00000347635 TM2D2Q9BX73 214 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 IGKV2D-26A0A0A0MRZ7 120 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 CCL24O00175 119 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 AJUBAQ96IF1 538 aa11.25□□□□□ -0.61
NUP50-201ENST00000347635 IGHV3-38A0A0C4DH36 116 aa11.24□□□□□ -0.61
NUP50-201ENST00000347635 HOXD3P31249 432 aaPredicted RBP11.24□□□□□ -0.61
NUP50-201ENST00000347635 FOXI1Q12951 378 aa11.24□□□□□ -0.61
NUP50-201ENST00000347635 RNASE13Q5GAN3 156 aaKnown RBP11.24□□□□□ -0.61
NUP50-201ENST00000347635 NTN5Q8WTR8 489 aaPredicted RBP11.24□□□□□ -0.61
NUP50-201ENST00000347635 A6NDX4 124 aa11.24□□□□□ -0.61
NUP50-201ENST00000347635 C11orf86A6NJI1 115 aa11.24□□□□□ -0.61
NUP50-201ENST00000347635 TIMM17AQ99595 171 aa11.24□□□□□ -0.61
NUP50-201ENST00000347635 DEFB1P60022 68 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 DEFB121Q5J5C9 76 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 TEN1Q86WV5 123 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 PRR14LQ5THK1 2151 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 OVOL2Q9BRP0 275 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 BLCAPP62952 87 aa11.23□□□□□ -0.61
NUP50-201ENST00000347635 A4D1N5 150 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 CARD19Q96LW7 228 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 PLCE1Q9P212 2302 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 K7EMT4 169 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 UNQ9165/PRO28630Q6UXU0 137 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 PIFOQ8TCI5 191 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 CACNA1AO00555 2505 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 IFITM1P13164 125 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 ATP6V0E2Q8NHE4 81 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 MUSTN1Q8IVN3 82 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 SPAG8Q99932 426 aaPredicted RBP11.22□□□□□ -0.61
NUP50-201ENST00000347635 ZFAND3Q9H8U3 227 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 XCL2Q9UBD3 114 aa11.22□□□□□ -0.61
NUP50-201ENST00000347635 C9orf66Q5T8R8 295 aa11.21□□□□□ -0.61
NUP50-201ENST00000347635 NEXN-AS1Q8NBZ9 246 aa11.21□□□□□ -0.61
NUP50-201ENST00000347635 NCOR2Q9Y618 2525 aa11.21□□□□□ -0.62
NUP50-201ENST00000347635 PAX4O43316 350 aa11.21□□□□□ -0.62
NUP50-201ENST00000347635 IGHV4-31P0DP07 118 aa11.21□□□□□ -0.62
NUP50-201ENST00000347635 CENPFP49454 3210 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 A0A0J9YXV3 536 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 PRSS47A8MTI9 375 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 TRBV12-3P01733 135 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 MALP21145 153 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 ZNRF2Q8NHG8 242 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 EBI3Q14213 229 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 ANKRD29Q8N6D5 301 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 MAPKAPK5-AS1Q8N8E1 139 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 SPANXA1Q9NS26 97 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 LINC01548A6NM66 108 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 GAGE2AQ6NT46 116 aa11.2□□□□□ -0.62
NUP50-201ENST00000347635 C11orf68Q9H3H3 251 aaKnown RBP11.2□□□□□ -0.62
NUP50-201ENST00000347635 SPANXB1Q9NS25 103 aaPredicted RBP11.19□□□□□ -0.62
NUP50-201ENST00000347635 CLPSL1A2RUU4 121 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 HERVK_113P63121 156 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 MED13LQ71F56 2210 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 GAGE12JA6NER3 117 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 GAGE4Q13068 117 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 GAGE5Q13069 117 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 NDUFA11Q86Y39 141 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 GPHB5Q86YW7 130 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 Q8N1Y9 231 aa11.19□□□□□ -0.62
NUP50-201ENST00000347635 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.18□□□□□ -0.62
NUP50-201ENST00000347635 TRAV25A0A0B4J276 109 aa11.18□□□□□ -0.62
NUP50-201ENST00000347635 IGKV2-29A2NJV5 120 aaPredicted RBP11.18□□□□□ -0.62
NUP50-201ENST00000347635 MRPS12O15235 138 aaKnown RBP11.18□□□□□ -0.62
NUP50-201ENST00000347635 PLA2G2AP14555 144 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 CRYBA4P53673 196 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 RNF152Q8N8N0 203 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 C15orf53Q8NAA6 179 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 C20orf173Q96LM9 149 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 JPT2Q9H910 190 aa11.17□□□□□ -0.62
NUP50-201ENST00000347635 Q6YL49 198 aa11.16□□□□□ -0.62
NUP50-201ENST00000347635 C4orf3Q8WVX3 66 aa11.16□□□□□ -0.62
NUP50-201ENST00000347635 INAFM2P0DMQ5 153 aa11.16□□□□□ -0.62
NUP50-201ENST00000347635 IGF1P05019 195 aa11.16□□□□□ -0.62
NUP50-201ENST00000347635 C6orf226Q5I0X4 101 aa11.16□□□□□ -0.62
NUP50-201ENST00000347635 NRACQ8N912 160 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 ICOSQ9Y6W8 199 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 GAS8-AS1O95177 125 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 LINC01620Q4KN68 170 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 Q8N6K4 173 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 WDR87Q6ZQQ6 2873 aa11.15□□□□□ -0.62
NUP50-201ENST00000347635 IGHG4P01861 327 aa11.15□□□□□ -0.63
NUP50-201ENST00000347635 CNFNQ9BYD5 112 aa11.15□□□□□ -0.63
NUP50-201ENST00000347635 PTH2Q96A98 100 aa11.14□□□□□ -0.63
NUP50-201ENST00000347635 TCL1BO95988 128 aa11.14□□□□□ -0.63
NUP50-201ENST00000347635 TMEM243Q9BU79 118 aa11.14□□□□□ -0.63
NUP50-201ENST00000347635 C11orf21Q9P2W6 132 aa11.14□□□□□ -0.63
NUP50-201ENST00000347635 CREBBPQ92793 2442 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 DNAJC9-AS1A6NH13 148 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 Q9H8V8 135 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 MDFICQ9P1T7 246 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 DAD1P61803 113 aa11.13□□□□□ -0.63
NUP50-201ENST00000347635 IGF2RP11717 2491 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 80.7 ms