RNA–Protein interactions for RNA: ENST00000344627.10

SGCA-202, Transcript of sarcoglycan alpha, humanhuman

TSL 1 (best) BASIC

Gene SGCA, Length 1,057 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SGCA-202ENST00000344627 AKR1C3P42330 323 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 FHITP49789 147 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 Q5VSD8 79 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 FAM213BQ8TBF2 198 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 SFT2D1Q8WV19 159 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 IL36BQ9NZH7 164 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 PHLDA3Q9Y5J5 127 aa8.35□□□□□ -1.07
SGCA-202ENST00000344627 IBA57-AS1B1ANH7 110 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 PAGE4O60829 102 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 CRIP1P50238 77 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 RAB5CP51148 216 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 NKX2-5P52952 324 aaPredicted RBP8.34□□□□□ -1.07
SGCA-202ENST00000344627 FAM74A4Q5TZK3 123 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 ZFP2Q6ZN57 461 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 C14orf178Q8N769 122 aaPredicted RBP8.34□□□□□ -1.07
SGCA-202ENST00000344627 SAMD10Q9BYL1 202 aa8.34□□□□□ -1.07
SGCA-202ENST00000344627 M0R381 172 aa8.33□□□□□ -1.08
SGCA-202ENST00000344627 FAT1Q14517 4588 aa8.33□□□□□ -1.08
SGCA-202ENST00000344627 PIK3CD-AS1Q5SR53 167 aa8.33□□□□□ -1.08
SGCA-202ENST00000344627 A0A087WWL8 130 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 IGLV5-52A0A0A0MRZ9 124 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 RHODO00212 210 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 KRTAP10-1P60331 282 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 LAGE3Q14657 143 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 TCEAL7Q9BRU2 100 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 TM2D2Q9BX73 214 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 Q9UF83 564 aa8.32□□□□□ -1.08
SGCA-202ENST00000344627 TEX46H3BTG2 121 aa8.31□□□□□ -1.08
SGCA-202ENST00000344627 LTAP01374 205 aa8.31□□□□□ -1.08
SGCA-202ENST00000344627 ZNF674Q2M3X9 581 aa8.31□□□□□ -1.08
SGCA-202ENST00000344627 URGCP-MRPS24S4R325 110 aa8.31□□□□□ -1.08
SGCA-202ENST00000344627 VPS13BQ7Z7G8 4022 aa8.31□□□□□ -1.08
SGCA-202ENST00000344627 HERC1Q15751 4861 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 A0A087WWC5 75 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 TRBV6-1A0A0K0K1D8 114 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 SCO2A0A1W2PP80 73 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 S100A9P06702 114 aaKnown RBP8.3□□□□□ -1.08
SGCA-202ENST00000344627 DNLZQ5SXM8 178 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 COX8CQ7Z4L0 72 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 BAGE2Q86Y30 109 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 ZFP82Q8N141 532 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 Q8N3U1 123 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 MBD3L1Q8WWY6 194 aa8.3□□□□□ -1.08
SGCA-202ENST00000344627 DNAH8Q96JB1 4490 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 LRCOL1A6NCL2 159 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 H2AFB1P0C5Y9 115 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 SSTP61278 116 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 LINC01559Q495D7 138 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 TOR2AQ5JU69 321 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 UFSP1Q6NVU6 142 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 DAZ4Q86SG3 579 aaKnown RBP8.29□□□□□ -1.08
SGCA-202ENST00000344627 Q8N814 137 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 SFRP2Q96HF1 295 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 DAZ3Q9NR90 486 aaKnown RBP8.29□□□□□ -1.08
SGCA-202ENST00000344627 COX11Q9Y6N1 276 aa8.29□□□□□ -1.08
SGCA-202ENST00000344627 TRAV8-3A0A0A6YYJ7 113 aa8.28□□□□□ -1.08
SGCA-202ENST00000344627 HAMPP81172 84 aa8.28□□□□□ -1.08
SGCA-202ENST00000344627 RPL19P84098 196 aaKnown RBP8.28□□□□□ -1.08
SGCA-202ENST00000344627 PRR27Q6MZM9 219 aa8.28□□□□□ -1.08
SGCA-202ENST00000344627 KCNIP4Q6PIL6 250 aa8.28□□□□□ -1.08
SGCA-202ENST00000344627 TEX261Q6UWH6 196 aa8.28□□□□□ -1.08
SGCA-202ENST00000344627 MUC21A0A0G2JKD1 596 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 MUC21A0A140T8X8 626 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 LECT2O14960 151 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 SMR3BP02814 79 aaPredicted RBP8.27□□□□□ -1.09
SGCA-202ENST00000344627 LINC00694P0DN24 101 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 SULT1A2P50226 295 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 BLOC1S1P78537 153 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 RPL36AP83881 106 aaKnown RBP8.27□□□□□ -1.09
SGCA-202ENST00000344627 RPL36ALQ969Q0 106 aaKnown RBP8.27□□□□□ -1.09
SGCA-202ENST00000344627 GNG13Q9P2W3 67 aa8.27□□□□□ -1.09
SGCA-202ENST00000344627 A0A087WX48 190 aa8.26□□□□□ -1.09
SGCA-202ENST00000344627 TMEM262E9PQX1 116 aa8.26□□□□□ -1.09
SGCA-202ENST00000344627 PLA2G1BP04054 148 aaKnown RBP8.26□□□□□ -1.09
SGCA-202ENST00000344627 RAB14P61106 215 aa8.26□□□□□ -1.09
SGCA-202ENST00000344627 ZNF56Q15929 161 aa8.26□□□□□ -1.09
SGCA-202ENST00000344627 SPANXN1Q5VSR9 72 aa8.26□□□□□ -1.09
SGCA-202ENST00000344627 DMBT1Q9UGM3 2413 aaPredicted RBP8.25□□□□□ -1.09
SGCA-202ENST00000344627 IGKV2D-24A0A075B6R9 120 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 TRBV10-1A0A0K0K1A3 114 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 F5H697 171 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 ALKAL2Q6UX46 152 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 OR10AG1Q8NH19 301 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 RMI2Q96E14 147 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 KLK12Q9UKR0 248 aa8.25□□□□□ -1.09
SGCA-202ENST00000344627 IGLV2-33A0A075B6J2 118 aaPredicted RBP8.24□□□□□ -1.09
SGCA-202ENST00000344627 TRBV7-3A0A075B6L6 115 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 RPL35P42766 123 aaKnown RBP8.24□□□□□ -1.09
SGCA-202ENST00000344627 RAB4BP61018 213 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 NIT1Q86X76 327 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 SREK1IP1Q8N9Q2 155 aaPredicted RBP8.24□□□□□ -1.09
SGCA-202ENST00000344627 BAALCQ8WXS3 180 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 UBE2WQ96B02 151 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 MLST8Q9BVC4 326 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 TPPP3Q9BW30 176 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 MANBALQ9NQG1 85 aa8.24□□□□□ -1.09
SGCA-202ENST00000344627 TRAV1-1A0A0B4J248 108 aa8.23□□□□□ -1.09
SGCA-202ENST00000344627 SMIM17P0DL12 118 aa8.23□□□□□ -1.09
SGCA-202ENST00000344627 TAGLN2P37802 199 aaKnown RBP8.23□□□□□ -1.09
SGCA-202ENST00000344627 UBE2D3P61077 147 aa8.23□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms