RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 MPV17L2Q567V2 206 aa13.79□□□□□ -0.2
HOXA9-201ENST00000343483 ANKRD39Q53RE8 183 aa13.79□□□□□ -0.2
HOXA9-201ENST00000343483 TRAV2A0A0B4J234 112 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 DEFB125Q8N687 156 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 C14orf178Q8N769 122 aaPredicted RBP13.78□□□□□ -0.2
HOXA9-201ENST00000343483 NUDT3O95989 172 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 GAGE1Q13065 139 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 ZNF124Q15973 351 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 AMTNQ6UX39 209 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 DKK2Q9UBU2 259 aa13.78□□□□□ -0.2
HOXA9-201ENST00000343483 LAGE3Q14657 143 aa13.77□□□□□ -0.21
HOXA9-201ENST00000343483 DPH3P1Q9H4G8 78 aa13.77□□□□□ -0.21
HOXA9-201ENST00000343483 CRLF1O75462 422 aa13.76□□□□□ -0.21
HOXA9-201ENST00000343483 PRSS1P07477 247 aa13.76□□□□□ -0.21
HOXA9-201ENST00000343483 HLA-DRB4P13762 266 aa13.76□□□□□ -0.21
HOXA9-201ENST00000343483 AP1S3Q96PC3 154 aa13.76□□□□□ -0.21
HOXA9-201ENST00000343483 HLA-DRB4X5D2U9 266 aa13.76□□□□□ -0.21
HOXA9-201ENST00000343483 MGPP08493 103 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 SMIM17P0DL12 118 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 TCTAP57738 103 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 C12orf54Q6X4T0 127 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 MAP6D1Q9H9H5 199 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 SORL1Q92673 2214 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 H3BMM0 161 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 NPSP0C0P6 89 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 BVES-AS1Q5T3Y7 98 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
HOXA9-201ENST00000343483 SPAG8Q99932 426 aaPredicted RBP13.75□□□□□ -0.21
HOXA9-201ENST00000343483 AGRNO00468 2067 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 IGHV1OR15-1A0A075B7D0 117 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 FGF6P10767 208 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 ODF1Q14990 250 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 C2orf91Q6ZV80 131 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 Q8N1Y9 231 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 SMIM2Q9BVW6 85 aa13.74□□□□□ -0.21
HOXA9-201ENST00000343483 FBN1P35555 2871 aaKnown RBP13.73□□□□□ -0.21
HOXA9-201ENST00000343483 IGHV3-16A0A0C4DH30 117 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 NXPH4O95158 308 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 NDUFA7O95182 113 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 Q6ZVH6 145 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 RASL10AQ92737 203 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 MDFICQ9P1T7 246 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 ATP5LO75964 103 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 PRIMA1Q86XR5 153 aa13.73□□□□□ -0.21
HOXA9-201ENST00000343483 ZNF256Q9Y2P7 627 aaPredicted RBP13.73□□□□□ -0.21
HOXA9-201ENST00000343483 ORAOV1Q8WV07 137 aa13.72□□□□□ -0.21
HOXA9-201ENST00000343483 COX11Q9Y6N1 276 aa13.72□□□□□ -0.21
HOXA9-201ENST00000343483 RBMY1BA6NDE4 496 aaKnown RBP13.71□□□□□ -0.21
HOXA9-201ENST00000343483 RBMY1EA6NEQ0 496 aaKnown RBP13.71□□□□□ -0.21
HOXA9-201ENST00000343483 RBMY1DP0C7P1 496 aaKnown RBP13.71□□□□□ -0.21
HOXA9-201ENST00000343483 SUMO2P61956 95 aaKnown RBP13.71□□□□□ -0.21
HOXA9-201ENST00000343483 RPL39LQ96EH5 51 aaKnown RBP13.71□□□□□ -0.21
HOXA9-201ENST00000343483 PROK1P58294 105 aa13.71□□□□□ -0.21
HOXA9-201ENST00000343483 NSUN5P1Q3KNT7 163 aa13.71□□□□□ -0.21
HOXA9-201ENST00000343483 BOD1L2Q8IYS8 172 aa13.71□□□□□ -0.21
HOXA9-201ENST00000343483 C20orf78Q9BR46 151 aa13.71□□□□□ -0.21
HOXA9-201ENST00000343483 ZMAT4Q9H898 229 aa13.71□□□□□ -0.21
HOXA9-201ENST00000343483 RBMY1A1P0DJD3 496 aaKnown RBP13.7□□□□□ -0.22
HOXA9-201ENST00000343483 RBMY1CP0DJD4 496 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 HTN1P15515 57 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 RBMY1FQ15415 496 aaKnown RBP13.7□□□□□ -0.22
HOXA9-201ENST00000343483 C9orf85Q96MD7 179 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 JPT2Q9H910 190 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 TRAV25A0A0B4J276 109 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 A8MTW9 85 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 NMUP48645 174 aa13.7□□□□□ -0.22
HOXA9-201ENST00000343483 CBY3A6NI87 242 aa13.69□□□□□ -0.22
HOXA9-201ENST00000343483 IGKCP01834 107 aa13.69□□□□□ -0.22
HOXA9-201ENST00000343483 ATRQ13535 2644 aa13.69□□□□□ -0.22
HOXA9-201ENST00000343483 A0A087WWL8 130 aa13.68□□□□□ -0.22
HOXA9-201ENST00000343483 ORMDL2Q53FV1 153 aa13.68□□□□□ -0.22
HOXA9-201ENST00000343483 SAP30O75446 220 aa13.68□□□□□ -0.22
HOXA9-201ENST00000343483 ODF3L2Q3SX64 289 aa13.68□□□□□ -0.22
HOXA9-201ENST00000343483 WNK1Q9H4A3 2382 aa13.68□□□□□ -0.22
HOXA9-201ENST00000343483 MUC4Q99102 2169 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 TRGV11A0A075B6L2 103 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 DPM2O94777 84 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 PCP2Q8IVA1 136 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 SYT8Q8NBV8 401 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 HHLA3Q9XRX5 114 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 KIF25-AS1Q9Y6Z4 181 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 ADARB2-AS1A8MUL3 147 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 PPP1R17O96001 155 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 POM121L12Q8N7R1 296 aa13.67□□□□□ -0.22
HOXA9-201ENST00000343483 LINC00315P59091 139 aa13.66□□□□□ -0.22
HOXA9-201ENST00000343483 TMEM97Q5BJF2 176 aa13.66□□□□□ -0.22
HOXA9-201ENST00000343483 FAM74A4Q5TZK3 123 aa13.66□□□□□ -0.22
HOXA9-201ENST00000343483 F5H697 171 aa13.65□□□□□ -0.22
HOXA9-201ENST00000343483 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP13.65□□□□□ -0.22
HOXA9-201ENST00000343483 TAX1BP3O14907 124 aa13.65□□□□□ -0.22
HOXA9-201ENST00000343483 K7EMI3 77 aa13.65□□□□□ -0.22
HOXA9-201ENST00000343483 SIVA1O15304 175 aa13.65□□□□□ -0.22
HOXA9-201ENST00000343483 MRPL35Q9NZE8 188 aaKnown RBP13.65□□□□□ -0.22
HOXA9-201ENST00000343483 A0A087WX48 190 aa13.64□□□□□ -0.23
HOXA9-201ENST00000343483 OR11H12B2RN74 326 aa13.64□□□□□ -0.23
HOXA9-201ENST00000343483 TOMM6Q96B49 74 aa13.64□□□□□ -0.23
HOXA9-201ENST00000343483 PRM2P04554 102 aa13.63□□□□□ -0.23
HOXA9-201ENST00000343483 ZNF876PQ49A33 203 aa13.63□□□□□ -0.23
HOXA9-201ENST00000343483 STHQ8IWL8 128 aa13.63□□□□□ -0.23
HOXA9-201ENST00000343483 SCGB3A1Q96QR1 104 aa13.63□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 129.5 ms