RNA–Protein interactions for RNA: ENST00000343139.9

HLA-DQA1-201, Transcript of major histocompatibility complex, class II, DQ alpha 1, humanhuman

APPRIS P1 BASIC

Gene HLA-DQA1, Length 1,591 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DQA1-201ENST00000343139 TMSB15BA0A087X1C1 80 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 OR5AL1P0C617 328 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RPS20P60866 119 aaKnown RBP9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 ESRGQ1W209 222 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 TMEM241Q24JQ0 296 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 DMRTA1Q5VZB9 504 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 UFSP1Q6NVU6 142 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 YPEL4Q96NS1 127 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 MRPS16Q9Y3D3 137 aaKnown RBP9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 LY96Q9Y6Y9 160 aa9.05□□□□□ -0.96
HLA-DQA1-201ENST00000343139 XKRY2A2RUG3 117 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 K7EQD1 137 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RHODO00212 210 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RHOHQ15669 191 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 NEGR1Q7Z3B1 354 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 SFRP2Q96HF1 295 aa9.04□□□□□ -0.96
HLA-DQA1-201ENST00000343139 GYPEP15421 78 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RAB5BP61020 215 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RPL19P84098 196 aaKnown RBP9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 Q6ZR54 194 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 SLC25A29Q8N8R3 303 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 PRADC1Q9BSG0 188 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 P01737 135 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 RAB5AP20339 215 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 SRIP30626 198 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 TIRAPP58753 221 aa9.03□□□□□ -0.96
HLA-DQA1-201ENST00000343139 C1orf196B1AJZ1 125 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 IGLC6P0CF74 106 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 RPL23P62829 140 aaKnown RBP9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 OR2D3Q8NGH3 330 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 OCC1Q8TAD7 63 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 ISOC2Q96AB3 205 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 ANAPC16Q96DE5 110 aa9.02□□□□□ -0.97
HLA-DQA1-201ENST00000343139 A0A1W2PPQ1 181 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 F2Z2F3 143 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 K7EN84 100 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 M0R381 172 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 CRYGDP07320 174 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 ADIRFQ15847 76 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 LYPD5Q6UWN5 251 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 NUDT10Q8NFP7 164 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 NUDT11Q96G61 164 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 Q9H8V8 135 aa9.01□□□□□ -0.97
HLA-DQA1-201ENST00000343139 DNAH10Q8IVF4 4471 aa9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 BTF3P20290 206 aaKnown RBP9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 ELOBQ15370 118 aa9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 FAM231DQ6ZW35 169 aa9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 OR10AG1Q8NH19 301 aa9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 JPT2Q9H910 190 aa9□□□□□ -0.97
HLA-DQA1-201ENST00000343139 TRBV24-1A0A075B6N3 115 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 IGHV3-73A0A0B4J1V6 119 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 NBDYA0A0U1RRE5 68 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 PPP1R2P9O14990 202 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 TTC32Q5I0X7 151 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 SPANXN1Q5VSR9 72 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 WDR73Q6P4I2 378 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 FER1L6-AS1Q8NA97 138 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 BTF3L4Q96K17 158 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 SAMD10Q9BYL1 202 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 DNAH2Q9P225 4427 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 K7EP13 123 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 CACNG7P62955 275 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 CT83Q5H943 113 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 Q6ZSN1 163 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 LINC00336Q6ZUF6 198 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 LINC01551Q86U37 167 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 CNFNQ9BYD5 112 aa8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 RPP21Q9H633 154 aaKnown RBP8.99□□□□□ -0.97
HLA-DQA1-201ENST00000343139 IGLV2-18A0A075B6J9 118 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 TRBV10-1A0A0K0K1A3 114 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 LOC100131303A0A0U1RQF7 123 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 LINC00694P0DN24 101 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 S100PP25815 95 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 IMMP2LQ96T52 175 aa8.98□□□□□ -0.97
HLA-DQA1-201ENST00000343139 A0A087WWL8 130 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 SIVA1O15304 175 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 CTRLP40313 264 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 RAB4BP61018 213 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 FAM74A4Q5TZK3 123 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 AP1S3Q96PC3 154 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 RNASE7Q9H1E1 156 aaKnown RBP8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 NACAE9PAV3 2078 aa8.97□□□□□ -0.97
HLA-DQA1-201ENST00000343139 M0R2N4 97 aa8.96□□□□□ -0.97
HLA-DQA1-201ENST00000343139 GZMBP10144 247 aa8.96□□□□□ -0.97
HLA-DQA1-201ENST00000343139 KIF25-AS1Q9Y6Z4 181 aa8.96□□□□□ -0.97
HLA-DQA1-201ENST00000343139 EPPK1P58107 5090 aaKnown RBP8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 FRAS1Q86XX4 4008 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 FOXA3P55318 350 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 C1orf134Q5TEV5 83 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 KCNIP4Q6PIL6 250 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 C14orf178Q8N769 122 aaPredicted RBP8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 OR10G8Q8NGN5 311 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 ATP6V0E2Q8NHE4 81 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GTSF1LQ9H1H1 148 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 FAM231BA6NCW3 169 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 A8MWL6 223 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 GATCO43716 136 aaKnown RBP8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 SMIM17P0DL12 118 aa8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 RPS10P46783 165 aaKnown RBP8.95□□□□□ -0.98
HLA-DQA1-201ENST00000343139 ERVFC1-1P60608 527 aa8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms