RNA–Protein interactions for RNA: ENST00000342245.8

SMPD1-201, Transcript of sphingomyelin phosphodiesterase 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SMPD1, Length 2,452 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMPD1-201ENST00000342245 LINC00527Q9UJ94 153 aa13.98□□□□□ -0.17
SMPD1-201ENST00000342245 TRAV21A0A0B4J279 112 aa13.97□□□□□ -0.17
SMPD1-201ENST00000342245 UBE2E1P51965 193 aa13.97□□□□□ -0.17
SMPD1-201ENST00000342245 POLR2KP53803 58 aaKnown RBP13.97□□□□□ -0.17
SMPD1-201ENST00000342245 MALRD1Q5VYJ5 2156 aa13.97□□□□□ -0.17
SMPD1-201ENST00000342245 ZNF22P17026 224 aaPredicted RBP13.97□□□□□ -0.17
SMPD1-201ENST00000342245 A0A0J9YXY3 114 aa13.96□□□□□ -0.17
SMPD1-201ENST00000342245 LOC400499M0QZD8 3231 aa13.96□□□□□ -0.17
SMPD1-201ENST00000342245 SDIM1Q6ZPB5 146 aa13.95□□□□□ -0.18
SMPD1-201ENST00000342245 C5orf38Q86SI9 138 aa13.95□□□□□ -0.18
SMPD1-201ENST00000342245 EDA2RQ9HAV5 297 aa13.95□□□□□ -0.18
SMPD1-201ENST00000342245 ATOX1O00244 68 aa13.95□□□□□ -0.18
SMPD1-201ENST00000342245 ABCA1O95477 2261 aa13.94□□□□□ -0.18
SMPD1-201ENST00000342245 KLK5Q9Y337 293 aaPredicted RBP13.94□□□□□ -0.18
SMPD1-201ENST00000342245 LINC00477Q96M19 166 aa13.93□□□□□ -0.18
SMPD1-201ENST00000342245 SPENQ96T58 3664 aaKnown RBP13.93□□□□□ -0.18
SMPD1-201ENST00000342245 FDCSPQ8NFU4 85 aa13.93□□□□□ -0.18
SMPD1-201ENST00000342245 NXPH4O95158 308 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 IGHV3-23P01764 117 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 COX7A1P24310 79 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 SEM1Q6ZVN7 128 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 C2orf48Q96LS8 159 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 TMEM258P61165 79 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 RPL39P62891 51 aaKnown RBP13.92□□□□□ -0.18
SMPD1-201ENST00000342245 PEMTQ9UBM1 199 aa13.92□□□□□ -0.18
SMPD1-201ENST00000342245 PRRC2CQ9Y520 2896 aaKnown RBP13.92□□□□□ -0.18
SMPD1-201ENST00000342245 TRACP01848 142 aa13.91□□□□□ -0.18
SMPD1-201ENST00000342245 DCANP1Q8TF63 244 aa13.91□□□□□ -0.18
SMPD1-201ENST00000342245 OVOL1O14753 267 aa13.91□□□□□ -0.18
SMPD1-201ENST00000342245 RHOHQ15669 191 aa13.91□□□□□ -0.18
SMPD1-201ENST00000342245 TRBV27A0A0K0K1C4 114 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 ASPMQ8IZT6 3477 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 TRBV6-5A0A0K0K1A5 114 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 I3L3M4 83 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 CLEC2BQ92478 149 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 LITAFQ99732 161 aa13.9□□□□□ -0.18
SMPD1-201ENST00000342245 HIST1H4AP62805 103 aaKnown RBP13.89□□□□□ -0.19
SMPD1-201ENST00000342245 MIAQ16674 131 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 NSUN5P1Q3KNT7 163 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 PRR9Q5T870 116 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 DYNLRB1Q9NP97 96 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 DPM3Q9P2X0 92 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 KIF25-AS1Q9Y6Z4 181 aa13.89□□□□□ -0.19
SMPD1-201ENST00000342245 PRSS2P07478 247 aa13.88□□□□□ -0.19
SMPD1-201ENST00000342245 C9orf139Q6ZV77 190 aa13.88□□□□□ -0.19
SMPD1-201ENST00000342245 MRAPQ8TCY5 172 aa13.88□□□□□ -0.19
SMPD1-201ENST00000342245 SMCR5Q8TEV8 140 aa13.88□□□□□ -0.19
SMPD1-201ENST00000342245 TRAV8-3A0A0A6YYJ7 113 aa13.88□□□□□ -0.19
SMPD1-201ENST00000342245 CADP27708 2225 aa13.87□□□□□ -0.19
SMPD1-201ENST00000342245 LINC00315P59091 139 aa13.87□□□□□ -0.19
SMPD1-201ENST00000342245 TMEM61Q8N0U2 210 aa13.87□□□□□ -0.19
SMPD1-201ENST00000342245 ZFAND2AQ8N6M9 145 aa13.87□□□□□ -0.19
SMPD1-201ENST00000342245 DAND5Q8N907 189 aa13.87□□□□□ -0.19
SMPD1-201ENST00000342245 F5H768 121 aa13.86□□□□□ -0.19
SMPD1-201ENST00000342245 DPH3Q96FX2 82 aa13.86□□□□□ -0.19
SMPD1-201ENST00000342245 BDP1A6H8Y1 2624 aa13.86□□□□□ -0.19
SMPD1-201ENST00000342245 C16orf92Q96LL3 132 aa13.86□□□□□ -0.19
SMPD1-201ENST00000342245 TIMM21Q9BVV7 248 aa13.86□□□□□ -0.19
SMPD1-201ENST00000342245 ZFHX4Q86UP3 3567 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 SUMO4Q6EEV6 95 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 IGFL2Q6UWQ7 119 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 IGHV3OR16-8A0A075B7F1 116 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 CLPSL1A2RUU4 121 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 TIMM17BO60830 172 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 IGHV3-30-3P0DP02 117 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 KLK9Q2XQG4 91 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 DEFB124Q8NES8 71 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 KLK9Q9UKQ9 250 aa13.85□□□□□ -0.19
SMPD1-201ENST00000342245 DSPP15924 2871 aaKnown RBP13.85□□□□□ -0.19
SMPD1-201ENST00000342245 RNASE3P12724 160 aaKnown RBP13.84□□□□□ -0.19
SMPD1-201ENST00000342245 CFAP47Q6ZTR5 3102 aa13.83□□□□□ -0.2
SMPD1-201ENST00000342245 INAFM2P0DMQ5 153 aa13.83□□□□□ -0.2
SMPD1-201ENST00000342245 ITLN2Q8WWU7 325 aaPredicted RBP13.83□□□□□ -0.2
SMPD1-201ENST00000342245 NDPQ00604 133 aa13.83□□□□□ -0.2
SMPD1-201ENST00000342245 PRB3Q04118 309 aaPredicted RBP13.83□□□□□ -0.2
SMPD1-201ENST00000342245 APRG1Q8IVJ8 170 aa13.83□□□□□ -0.2
SMPD1-201ENST00000342245 U3KQE9 123 aa13.83□□□□□ -0.2
SMPD1-201ENST00000342245 IGHV3-64A0A075B6Q5 118 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 IGHV3-35A0A0C4DH35 117 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 hADV29S1A0JD25 119 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 RNASE6Q93091 150 aaKnown RBP13.82□□□□□ -0.2
SMPD1-201ENST00000342245 IGHV3-66A0A0C4DH42 116 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 RNASE4P34096 147 aaKnown RBP13.82□□□□□ -0.2
SMPD1-201ENST00000342245 FAM27E3Q08E93 113 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 ZGRF1Q86YA3 2104 aa13.82□□□□□ -0.2
SMPD1-201ENST00000342245 DEFB109BQ30KR1 87 aa13.81□□□□□ -0.2
SMPD1-201ENST00000342245 C15orf32Q32M92 178 aa13.81□□□□□ -0.2
SMPD1-201ENST00000342245 FAM110DQ8TAY7 271 aaPredicted RBP13.81□□□□□ -0.2
SMPD1-201ENST00000342245 EEF1AKMT3Q96AZ1 226 aa13.81□□□□□ -0.2
SMPD1-201ENST00000342245 IGHV1-58A0A0C4DH39 117 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 A0A0J9YXV3 536 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 COX7A2LO14548 114 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 C22orf34Q6ZV56 151 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 KIR2DL5BQ8NHK3 375 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 SPRY2O43597 315 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 NDUFA12Q9UI09 145 aa13.8□□□□□ -0.2
SMPD1-201ENST00000342245 F5H697 171 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 RPL18AQ02543 176 aaKnown RBP13.79□□□□□ -0.2
SMPD1-201ENST00000342245 ADAMTSL4-AS1Q5T5F5 129 aa13.79□□□□□ -0.2
SMPD1-201ENST00000342245 FAM222AQ5U5X8 452 aa13.79□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 64.2 ms