RNA–Protein interactions for RNA: ENST00000341455.10

CCDC66-202, Transcript of coiled-coil domain containing 66, humanhuman

TSL 1 (best)

Gene CCDC66, Length 3,042 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC66-202ENST00000341455 FAM213BQ8TBF2 198 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 RASL10AQ92737 203 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 KCNS1Q96KK3 526 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 VGLL1Q99990 258 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 PSG8Q9UQ74 426 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 TRAV21A0A0B4J279 112 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 IGHV3-16A0A0C4DH30 117 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 IGHV3-66A0A0C4DH42 116 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 PGPA6NDG6 321 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 KNCNA6PVL3 124 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 C11orf94C9JXX5 98 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 OR5AL1P0C617 328 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 HLA-DMBP28068 263 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 CRIP1P50238 77 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 RPS20P60866 119 aaKnown RBP2.47□□□□□ -2.01
CCDC66-202ENST00000341455 TMEM78Q5T7P6 136 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 BOD1L2Q8IYS8 172 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 Q8N1X5 172 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 IMMP2LQ96T52 175 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 WFDC10AQ9H1F0 79 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 Q9HAA7 133 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 RETNQ9HD89 108 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 IL36BQ9NZH7 164 aa2.47□□□□□ -2.01
CCDC66-202ENST00000341455 IGHV3-49A0A0A0MS15 119 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 RPL35AP18077 110 aaKnown RBP2.46□□□□□ -2.02
CCDC66-202ENST00000341455 SMUG1Q53HV7 270 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 ACTL10Q5JWF8 245 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 C2orf48Q96LS8 159 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 CARHSP1Q9Y2V2 147 aaKnown RBP2.46□□□□□ -2.02
CCDC66-202ENST00000341455 TRBV20OR9-2A0A075B6H5 130 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 TRAV9-1A0A075B6T8 112 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 IGHV1OR15-1A0A075B7D0 117 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 IGHV3OR16-8A0A075B7F1 116 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 IGKV2-40A0A087WW87 121 aaPredicted RBP2.46□□□□□ -2.02
CCDC66-202ENST00000341455 IGLV5-52A0A0A0MRZ9 124 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 M0QXV9 152 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 M0R3E3 92 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 IGKV2D-40P01614 121 aaPredicted RBP2.46□□□□□ -2.02
CCDC66-202ENST00000341455 ATP5G3P48201 142 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 LAGE3Q14657 143 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 OR10G8Q8NGN5 311 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 SFT2D1Q8WV19 159 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 ZC2HC1AQ96GY0 325 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 NDFIP1Q9BT67 221 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 SLC35B3Q9H1N7 401 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 OSTCQ9NRP0 149 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 TMEM242Q9NWH2 141 aa2.46□□□□□ -2.02
CCDC66-202ENST00000341455 COL7A1Q02388 2944 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 CEBPGP53567 150 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 FAM162BQ5T6X4 162 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 C15orf54Q8N8G6 183 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 CMTM2Q8TAZ6 248 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 BAALCQ8WXS3 180 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 UPK3BQ9BT76 320 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 TUBA4BQ9H853 241 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 RYR1P21817 5038 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 STARD9Q9P2P6 4700 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 CSMD3Q7Z407 3707 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 A0A087WWC5 75 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 IGKV3D-20A0A0C4DH25 116 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 FABP5P3A8MUU1 101 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 F6UB75 175 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 TYMSP04818 313 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 RNASE3P12724 160 aaKnown RBP2.45□□□□□ -2.02
CCDC66-202ENST00000341455 AKR1C3P42330 323 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 RPL35P42766 123 aaKnown RBP2.45□□□□□ -2.02
CCDC66-202ENST00000341455 ZNF80P51504 273 aaPredicted RBP2.45□□□□□ -2.02
CCDC66-202ENST00000341455 RANP62826 216 aaKnown RBP2.45□□□□□ -2.02
CCDC66-202ENST00000341455 PEA15Q15121 130 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 ALKAL2Q6UX46 152 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 GOLT1AQ6ZVE7 132 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 FAM218AQ96MZ4 157 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 KIF25-AS1Q9Y6Z4 181 aa2.45□□□□□ -2.02
CCDC66-202ENST00000341455 IGHV3OR16-13A0A075B7E8 117 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 IGHV3-74A0A0B4J1X5 117 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 TRAV4A0A0B4J268 109 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 B4DEV8 164 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 K7EN84 100 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 K7EP13 123 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 NKX2-5P52952 324 aaPredicted RBP2.44□□□□□ -2.02
CCDC66-202ENST00000341455 RPL32P62910 135 aaKnown RBP2.44□□□□□ -2.02
CCDC66-202ENST00000341455 CACNG7P62955 275 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 ERCC8Q13216 396 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 RASL11AQ6T310 242 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 SFRP2Q96HF1 295 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 SDF2L1Q9HCN8 221 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 SELENOKQ9Y6D0 94 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 V9GYY9 64 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 PKD1P98161 4303 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 SMIM27A0A1W2PRY6 76 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 LINC01546A6NGU7 62 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 F2Z2F3 143 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 M0R2P5 195 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 SH2D1AO60880 128 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 FGF8P55075 233 aaPredicted RBP2.44□□□□□ -2.02
CCDC66-202ENST00000341455 GNG5P63218 68 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 BTN1A1Q13410 526 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 C12orf74Q32Q52 190 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 C10orf25Q5T742 122 aa2.44□□□□□ -2.02
CCDC66-202ENST00000341455 LINC01551Q86U37 167 aa2.44□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 44.5 ms