RNA–Protein interactions for RNA: ENST00000340951.8

EXD3-201, Transcript of exonuclease 3'-5' domain containing 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene EXD3, Length 2,872 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXD3-201ENST00000340951 J3QQQ9 107 aa13□□□□□ -0.33
EXD3-201ENST00000340951 M0QXV9 152 aa13□□□□□ -0.33
EXD3-201ENST00000340951 C1orf122Q6ZSJ8 110 aa13□□□□□ -0.33
EXD3-201ENST00000340951 RPL39P62891 51 aaKnown RBP12.99□□□□□ -0.33
EXD3-201ENST00000340951 BEX4Q9NWD9 120 aaPredicted RBP12.99□□□□□ -0.33
EXD3-201ENST00000340951 TRAV2A0A0B4J234 112 aa12.99□□□□□ -0.33
EXD3-201ENST00000340951 CLPSL1A2RUU4 121 aa12.99□□□□□ -0.33
EXD3-201ENST00000340951 EIF4EBP3O60516 100 aaPredicted RBP12.99□□□□□ -0.33
EXD3-201ENST00000340951 ELANEP08246 267 aa12.99□□□□□ -0.33
EXD3-201ENST00000340951 ODF3Q96PU9 254 aa12.99□□□□□ -0.33
EXD3-201ENST00000340951 LINC01620Q4KN68 170 aa12.99□□□□□ -0.33
EXD3-201ENST00000340951 CENPVL3A0A0U1RRI6 287 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 ATXN8Q156A1 80 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 ECSCRQ19T08 205 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 Q6Q795 121 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 CLEC19AQ6UXS0 136 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 TMEM263Q8WUH6 116 aaKnown RBP12.98□□□□□ -0.33
EXD3-201ENST00000340951 C16orf92Q96LL3 132 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 AMELXQ99217 191 aa12.98□□□□□ -0.33
EXD3-201ENST00000340951 IGIPA6NJ69 53 aa12.97□□□□□ -0.33
EXD3-201ENST00000340951 GPHB5Q86YW7 130 aa12.97□□□□□ -0.33
EXD3-201ENST00000340951 ZNRF2Q8NHG8 242 aa12.97□□□□□ -0.33
EXD3-201ENST00000340951 MRPL53Q96EL3 112 aaKnown RBP12.97□□□□□ -0.33
EXD3-201ENST00000340951 IGHV1-69DA0A0B4J2H0 117 aa12.96□□□□□ -0.33
EXD3-201ENST00000340951 HIVEP3Q5T1R4 2406 aa12.96□□□□□ -0.33
EXD3-201ENST00000340951 IGHV7-81A0A0B4J1V7 117 aa12.96□□□□□ -0.34
EXD3-201ENST00000340951 METTL26Q96S19 204 aa12.96□□□□□ -0.34
EXD3-201ENST00000340951 PPP1R17O96001 155 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 P0DMU3 169 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 FAM231AP0DMU4 169 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 FAM231CP0DMU5 169 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 ADORA2A-AS1P86434 159 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 MUSTN1Q8IVN3 82 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 TRAV21A0A0B4J279 112 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 MEIG1Q5JSS6 88 aa12.95□□□□□ -0.34
EXD3-201ENST00000340951 IGHV3-64A0A075B6Q5 118 aa12.94□□□□□ -0.34
EXD3-201ENST00000340951 H3BMM0 161 aa12.94□□□□□ -0.34
EXD3-201ENST00000340951 OR10J6PQ8NGY7 276 aa12.94□□□□□ -0.34
EXD3-201ENST00000340951 UBE2WQ96B02 151 aa12.94□□□□□ -0.34
EXD3-201ENST00000340951 A0A0B4J2C4 111 aa12.94□□□□□ -0.34
EXD3-201ENST00000340951 GNRH2O43555 120 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 ZFAND2AQ8N6M9 145 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 TMEM141Q96I45 108 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 C20orf173Q96LM9 149 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 RPL13AP40429 203 aaKnown RBP12.93□□□□□ -0.34
EXD3-201ENST00000340951 DEFB1P60022 68 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 LY6G5BQ8NDX9 201 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 CCDC140Q96MF4 163 aa12.93□□□□□ -0.34
EXD3-201ENST00000340951 CELSR1Q9NYQ6 3014 aa12.92□□□□□ -0.34
EXD3-201ENST00000340951 TRBV10-2A0A0K0K1G8 114 aa12.92□□□□□ -0.34
EXD3-201ENST00000340951 ZNF876PQ49A33 203 aa12.92□□□□□ -0.34
EXD3-201ENST00000340951 SPG11Q96JI7 2443 aa12.92□□□□□ -0.34
EXD3-201ENST00000340951 ODF3BA8MYP8 253 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 RNASE4P34096 147 aaKnown RBP12.91□□□□□ -0.34
EXD3-201ENST00000340951 LGALS9O00182 355 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 C2orf82Q6UX34 121 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 FAM110DQ8TAY7 271 aaPredicted RBP12.91□□□□□ -0.34
EXD3-201ENST00000340951 TIMM17AQ99595 171 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 ZFHX3Q15911 3703 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 C3orf56Q8N813 242 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 LENEPQ9Y5L5 61 aa12.91□□□□□ -0.34
EXD3-201ENST00000340951 TRAV16A0A0A6YYK6 109 aaPredicted RBP12.9□□□□□ -0.34
EXD3-201ENST00000340951 TRIAP1O43715 76 aa12.9□□□□□ -0.34
EXD3-201ENST00000340951 LY6DQ14210 128 aa12.9□□□□□ -0.34
EXD3-201ENST00000340951 Q8N6K4 173 aa12.9□□□□□ -0.34
EXD3-201ENST00000340951 F5H697 171 aa12.9□□□□□ -0.34
EXD3-201ENST00000340951 VMO1Q7Z5L0 202 aa12.9□□□□□ -0.34
EXD3-201ENST00000340951 OPRPNQ99935 248 aaPredicted RBP12.9□□□□□ -0.34
EXD3-201ENST00000340951 LEPROTO15243 131 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 RNASE3P12724 160 aaKnown RBP12.89□□□□□ -0.35
EXD3-201ENST00000340951 JPT2Q9H910 190 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 A0A1W2PPR1 153 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 VCYO14598 125 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 POLR2KP53803 58 aaKnown RBP12.89□□□□□ -0.35
EXD3-201ENST00000340951 KLRB1Q12918 225 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 ZNF56Q15929 161 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 LINC00477Q96M19 166 aa12.89□□□□□ -0.35
EXD3-201ENST00000340951 ATP6V0E1O15342 81 aa12.88□□□□□ -0.35
EXD3-201ENST00000340951 C9orf139Q6ZV77 190 aa12.88□□□□□ -0.35
EXD3-201ENST00000340951 Q8N9W7 124 aa12.88□□□□□ -0.35
EXD3-201ENST00000340951 CHCHD5Q9BSY4 110 aa12.88□□□□□ -0.35
EXD3-201ENST00000340951 VPS13CQ709C8 3753 aa12.88□□□□□ -0.35
EXD3-201ENST00000340951 A0A087WWL8 130 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 SDHAF1A6NFY7 115 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 G3V318 75 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 BRI3O95415 125 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 SUMO4Q6EEV6 95 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 MDFICQ9P1T7 246 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 TMEM223A0PJW6 202 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 ITLN2Q8WWU7 325 aaPredicted RBP12.87□□□□□ -0.35
EXD3-201ENST00000340951 EEF1AKMT3Q96AZ1 226 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 ZNF256Q9Y2P7 627 aaPredicted RBP12.87□□□□□ -0.35
EXD3-201ENST00000340951 LINC00315P59091 139 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 FBXL19-AS1Q494R0 122 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 SPANXA1Q9NS26 97 aa12.87□□□□□ -0.35
EXD3-201ENST00000340951 IGHV4OR15-8A0A075B7B6 117 aa12.86□□□□□ -0.35
EXD3-201ENST00000340951 A0A087WW49 117 aa12.86□□□□□ -0.35
EXD3-201ENST00000340951 TRBV30A0A0K0K1B3 111 aa12.86□□□□□ -0.35
EXD3-201ENST00000340951 MED14OSP0DP75 135 aa12.86□□□□□ -0.35
EXD3-201ENST00000340951 MUC4Q99102 2169 aa12.86□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms